Miyakogusa Predicted Gene

Lj1g3v0415990.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0415990.1 tr|Q952Q7|Q952Q7_SOLLC Succinate dehydrogenase
subunit 4 (Fragment) OS=Solanum lycopersicum GN=sdh4
,45.68,0.000000000006,seg,NULL; no description,NULL,CUFF.25866.1
         (244 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS357071 similar to UniRef100_Q8RVA9 Cluster: Succinate...   484   e-136
gnl|LJGI|TC70155 similar to UniRef100_Q8RVA9 Cluster: Succinate ...   484   e-136
gnl|LJGI|TC66606 similar to UniRef100_Q8RVA9 Cluster: Succinate ...   484   e-136

>gnl|LJGI|FS357071 similar to UniRef100_Q8RVA9 Cluster: Succinate dehydrogenase
           subunit 4; n=1; Pisum sativum|Rep: Succinate
           dehydrogenase subunit 4 - Pisum sativum (Garden pea),
           partial (51%)
          Length = 673

 Score =  484 bits (244), Expect = e-136
 Identities = 244/244 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtcaaagagagagcagctcctaaaagtttctgcagttgcctcccttcttttattatac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 atgtcaaagagagagcagctcctaaaagtttctgcagttgcctcccttcttttattatac 350

                                                                       
Query: 61  ccaaatgcctattcgttgcttgtagcaaattgctttgtattctggcacactcatgcgggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ccaaatgcctattcgttgcttgtagcaaattgctttgtattctggcacactcatgcgggg 290

                                                                       
Query: 121 atcgaagagattttagcagattatgttcaccatgaagtgacccgagagtttgtttcgatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atcgaagagattttagcagattatgttcaccatgaagtgacccgagagtttgtttcgatc 230

                                                                       
Query: 181 tctctcagattgttcctgataattgcaatgaaggatgtgttcttaaatttgatttttgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tctctcagattgttcctgataattgcaatgaaggatgtgttcttaaatttgatttttgta 170

               
Query: 241 taat 244
           ||||
Sbjct: 169 taat 166


>gnl|LJGI|TC70155 similar to UniRef100_Q8RVA9 Cluster: Succinate dehydrogenase
           subunit 4; n=1; Pisum sativum|Rep: Succinate
           dehydrogenase subunit 4 - Pisum sativum (Garden pea),
           partial (83%)
          Length = 770

 Score =  484 bits (244), Expect = e-136
 Identities = 244/244 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcaaagagagagcagctcctaaaagtttctgcagttgcctcccttcttttattatac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 atgtcaaagagagagcagctcctaaaagtttctgcagttgcctcccttcttttattatac 532

                                                                       
Query: 61  ccaaatgcctattcgttgcttgtagcaaattgctttgtattctggcacactcatgcgggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ccaaatgcctattcgttgcttgtagcaaattgctttgtattctggcacactcatgcgggg 592

                                                                       
Query: 121 atcgaagagattttagcagattatgttcaccatgaagtgacccgagagtttgtttcgatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 atcgaagagattttagcagattatgttcaccatgaagtgacccgagagtttgtttcgatc 652

                                                                       
Query: 181 tctctcagattgttcctgataattgcaatgaaggatgtgttcttaaatttgatttttgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tctctcagattgttcctgataattgcaatgaaggatgtgttcttaaatttgatttttgta 712

               
Query: 241 taat 244
           ||||
Sbjct: 713 taat 716


>gnl|LJGI|TC66606 similar to UniRef100_Q8RVA9 Cluster: Succinate dehydrogenase
           subunit 4; n=1; Pisum sativum|Rep: Succinate
           dehydrogenase subunit 4 - Pisum sativum (Garden pea),
           partial (73%)
          Length = 735

 Score =  484 bits (244), Expect = e-136
 Identities = 244/244 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcaaagagagagcagctcctaaaagtttctgcagttgcctcccttcttttattatac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atgtcaaagagagagcagctcctaaaagtttctgcagttgcctcccttcttttattatac 311

                                                                       
Query: 61  ccaaatgcctattcgttgcttgtagcaaattgctttgtattctggcacactcatgcgggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ccaaatgcctattcgttgcttgtagcaaattgctttgtattctggcacactcatgcgggg 371

                                                                       
Query: 121 atcgaagagattttagcagattatgttcaccatgaagtgacccgagagtttgtttcgatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 atcgaagagattttagcagattatgttcaccatgaagtgacccgagagtttgtttcgatc 431

                                                                       
Query: 181 tctctcagattgttcctgataattgcaatgaaggatgtgttcttaaatttgatttttgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tctctcagattgttcctgataattgcaatgaaggatgtgttcttaaatttgatttttgta 491

               
Query: 241 taat 244
           ||||
Sbjct: 492 taat 495