Miyakogusa Predicted Gene
- Lj1g3v0415900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0415900.1 tr|A9SXC9|A9SXC9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_231478,42,0.00008,E2F_TDP,Transcription factor
E2F/dimerisation partner (TDP); "Winged helix" DNA-binding
domain,NULL;,CUFF.25793.1
(1119 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO012178 similar to UniRef100_A7PD78 Cluster: Chromosom... 1231 0.0
>gnl|LJGI|GO012178 similar to UniRef100_A7PD78 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 635
Score = 1231 bits (621), Expect = 0.0
Identities = 630/633 (99%)
Strand = Plus / Plus
Query: 25 agacaccacacctacaatcgaaagcaaaaatctctcggtctcttatgcaccaatttcttg 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agacaccacacctacaatcgaaagcaaaaatctctcggtctcttatgcaccaatttcttg 62
Query: 85 agcttgtataacaaagaaggcatccacctaattggcctcgacgatgcctgctcacgatta 144
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agcttgtacaacaaagaaggtatccacctaattggcctcgacgatgcctgctcacgatta 122
Query: 145 ggggtcgagaggcgtcggatctatgatatcgtcaacgtcttggagagtgttgggatgctt 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggggtcgagaggcgtcggatctatgatatcgtcaacgtcttggagagtgttgggatgctt 182
Query: 205 gcgagaaaagctaagaatcaatatacctggaaaggcttcgctgtgattccagaggcgttg 264
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 183 gcgagaaaagctaagaatcaatatacctggaaaggcttcgctgtaattccagaggcgttg 242
Query: 265 cgcgaacttaaggatgagggtttgaaggagaatctatttgatgctgctaatgacagtgcc 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cgcgaacttaaggatgagggtttgaaggagaatctatttgatgctgctaatgacagtgcc 302
Query: 325 aaagtgtctgatgatgagtatgatgaagaagctaatccagctactggaagtcaaaatgac 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaagtgtctgatgatgagtatgatgaagaagctaatccagctactggaagtcaaaatgac 362
Query: 385 aagtccaactctgattctgccactcttgtcaagtcttcacaaaatgaaaacagaaaggaa 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aagtccaactctgattctgccactcttgtcaagtcttcacaaaatgaaaacagaaaggaa 422
Query: 445 aagtctctaacactgcttactcagaattttgtcaagctctttgtctgctctaatattcaa 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aagtctctaacactgcttactcagaattttgtcaagctctttgtctgctctaatattcaa 482
Query: 505 atggtctcccttgacgatgctgcaaagttgttgcttggaaatgttgatactgctatgatg 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 atggtctcccttgacgatgctgcaaagttgttgcttggaaatgttgatactgctatgatg 542
Query: 565 agaacaaaagtcagacgcctgtatgatattgcaaatgtgctatcctctatcaacctaatt 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agaacaaaagtcagacgcctgtatgatattgcaaatgtgctatcctctatcaacctaatt 602
Query: 625 gaaaagacccatatggcagaatcaagaaaacca 657
|||||||||||||||||||||||||||||||||
Sbjct: 603 gaaaagacccatatggcagaatcaagaaaacca 635