Miyakogusa Predicted Gene

Lj1g3v0415660.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0415660.1 tr|D2W1C2|D2W1C2_NAEGR Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_75165 PE=4
SV=1,35.14,9.7,seg,NULL,CUFF.25769.1
         (247 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64663 similar to UniRef100_Q9AUH7 Cluster: UVI1; n=1;...   174   2e-43

>gnl|LJGI|TC64663 similar to UniRef100_Q9AUH7 Cluster: UVI1; n=1; Pisum sativum|Rep:
           UVI1 - Pisum sativum (Garden pea), partial (78%)
          Length = 644

 Score =  174 bits (88), Expect = 2e-43
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacatagcatatttcaacaaaaagtgtgttgagtgnnnnnnnnnnnnncatacttta 60
           ||||||||||||||||||||||||||||||||||||||             |||||||||
Sbjct: 516 atggacatagcatatttcaacaaaaagtgtgttgagtgttttttcttttttcatacttta 575

                                                                       
Query: 61  tggtggttgagccatggactcttcattttagtttatggtatgtttggttgtgaaagtaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tggtggttgagccatggactcttcattttagtttatggtatgtttggttgtgaaagtaaa 635

                  
Query: 121 tggacag 127
           |||||||
Sbjct: 636 tggacag 642