Miyakogusa Predicted Gene
- Lj1g3v0415480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0415480.1 Non Chatacterized Hit- tr|I1Q127|I1Q127_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,45,1e-16,ARM
repeat,Armadillo-type fold; RING/U-box,NULL; no description,Zinc
finger, RING/FYVE/PHD-type; no ,CUFF.25755.1
(1581 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69347 similar to UniRef100_A7PD68 Cluster: Chromosome... 3126 0.0
gnl|LJGI|FS316697 similar to UniRef100_A7PD68 Cluster: Chromosom... 959 0.0
>gnl|LJGI|TC69347 similar to UniRef100_A7PD68 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 1927
Score = 3126 bits (1577), Expect = 0.0
Identities = 1580/1581 (99%)
Strand = Plus / Plus
Query: 1 atgggtggcaacggtaaacacaggtggaaaatctccttccaccgttcttcctcccactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 atgggtggcaacggtaaacacaggtggaaaatctccttccaccgttcttcctcccactct 152
Query: 61 aagcttgaacctcctaaggaatttctatgccccatttccgggtcattaatgtccgacccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 aagcttgaacctcctaaggaatttctatgccccatttccgggtcattaatgtccgacccg 212
Query: 121 gttgtcgtctcttcgggtcaaacattcgagcgtctctccgttcaagtctgcaacgacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gttgtcgtctcttcgggtcaaacattcgagcgtctctccgttcaagtctgcaacgacttg 272
Query: 181 aagttctcacccaatctcaacggaacccgacccgatttctccaccgtcatccccaattta 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aagttctcacccaatctcaacggaacccgacccgatttctccaccgtcatccccaatttg 332
Query: 241 gccatcaaaaccaccatcctcaactggtgccgcaaatccgccaccccaccaccgtgcccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gccatcaaaaccaccatcctcaactggtgccgcaaatccgccaccccaccaccgtgcccg 392
Query: 301 cccgattactccgccgtcgagagcctggttcgtcaagcaatggcggcggagccgcaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cccgattactccgccgtcgagagcctggttcgtcaagcaatggcggcggagccgcaagag 452
Query: 361 agtgttagggtttccgagaaggagctgctgaaggcggttgctgataacccggtgatgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agtgttagggtttccgagaaggagctgctgaaggcggttgctgataacccggtgatgata 512
Query: 421 ggtttctctcacgccgccactgaactgggtccgccccgggttaacgacttcaactccgcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggtttctctcacgccgccactgaactgggtccgccccgggttaacgacttcaactccgcg 572
Query: 481 tcgtcgtcggaggaatcggttatcatcgccgcgagtccccccggaacgccgttgccgctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tcgtcgtcggaggaatcggttatcatcgccgcgagtccccccggaacgccgttgccgctc 632
Query: 541 accactcgccctacttgcttctcttcgtcgtcgtcgtcctcctgcgagatcgaagcgcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 accactcgccctacttgcttctcttcgtcgtcgtcgtcctcctgcgagatcgaagcgcaa 692
Query: 601 aaccctagcggagctcctccttcggaggaggaggcgagattggtgaagatgatgaagagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 aaccctagcggagctcctccttcggaggaggaggcgagattggtgaagatgatgaagagc 752
Query: 661 aacgaggttttcgagcaagaagaaggcgtggttatgctgaggagtgtcacccggaacagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 aacgaggttttcgagcaagaagaaggcgtggttatgctgaggagtgtcacccggaacagg 812
Query: 721 gaagaggctcgggtttcgctctgcacgccgcgtcttctctcggcgctgcggttgttggtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gaagaggctcgggtttcgctctgcacgccgcgtcttctctcggcgctgcggttgttggtg 872
Query: 781 gagtcgcgatacgtcgtcgttcaggtcaacgcggtggcgtcgctggtcaacctttctctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gagtcgcgatacgtcgtcgttcaggtcaacgcggtggcgtcgctggtcaacctttctctg 932
Query: 841 gagaagactaacaaggtgaggattgtgcggtcagggtttgttccgtttctcatcgatgtt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 gagaagactaacaaggtgaggattgtgcggtcagggtttgttccgtttctcatcgatgtt 992
Query: 901 ttgaaagggggattcagtgagtcgcaggagcacgctgcgggcgcgcttttcagcttggcg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 ttgaaagggggattcagtgagtcgcaggagcacgctgcgggcgcgcttttcagcttggcg 1052
Query: 961 ctggatgatgacaacaagatggcgattggggttctcggcgcgttgcagccgctaatgcac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 ctggatgatgacaacaagatggcgattggggttctcggcgcgttgcagccgctaatgcac 1112
Query: 1021 gcgctgcggtcggaatccgagaggactaggcatgactcggcgcttgcgctgtaccacttg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 gcgctgcggtcggaatccgagaggactaggcatgactcggcgcttgcgctgtaccacttg 1172
Query: 1081 actctggtacagagcaaccgggtcaagctggtgaagctcggggttgtcccgacgctgctt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 actctggtacagagcaaccgggtcaagctggtgaagctcggggttgtcccgacgctgctt 1232
Query: 1141 tcaatggtggcgaacgggaatctggcgagccgggtgctgctggttctgtgcaatgtggct 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 tcaatggtggcgaacgggaatctggcgagccgggtgctgctggttctgtgcaatgtggct 1292
Query: 1201 gcgtgcgtggaggggcggaccgcgatgctggatggcaatgcggttgagattctggtggat 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 gcgtgcgtggaggggcggaccgcgatgctggatggcaatgcggttgagattctggtggat 1352
Query: 1261 ttgctgaggaggaataagtttgactcggaggctactcgggagaactgcgtggctgcgctg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 ttgctgaggaggaataagtttgactcggaggctactcgggagaactgcgtggctgcgctg 1412
Query: 1321 tacgcgctgagtcatgggagcttgaggttcaaagggttggcaaaggaggctaaggctgtg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 tacgcgctgagtcatgggagcttgaggttcaaagggttggcaaaggaggctaaggctgtg 1472
Query: 1381 gaggtactgagggagattgaggagacgggaacggagcgggcaagggagaaggctcggagg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 gaggtactgagggagattgaggagacgggaacggagcgggcaagggagaaggctcggagg 1532
Query: 1441 gtgttgcagacgatgagggctggtgaggatcaaccagggtcacagtttgatagcctcttc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1533 gtgttgcagacgatgagggctggtgaggatcaaccagggtcacagtttgatagcctcttc 1592
Query: 1501 gaatccgatgggttgcctcggactcgccaccgagctgctggtgcctggaacaccaaccat 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1593 gaatccgatgggttgcctcggactcgccaccgagctgctggtgcctggaacaccaaccat 1652
Query: 1561 gtgaactcaaccacattttag 1581
|||||||||||||||||||||
Sbjct: 1653 gtgaactcaaccacattttag 1673
>gnl|LJGI|FS316697 similar to UniRef100_A7PD68 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 718
Score = 959 bits (484), Expect = 0.0
Identities = 487/488 (99%)
Strand = Plus / Plus
Query: 1 atgggtggcaacggtaaacacaggtggaaaatctccttccaccgttcttcctcccactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atgggtggcaacggtaaacacaggtggaaaatctccttccaccgttcttcctcccactct 290
Query: 61 aagcttgaacctcctaaggaatttctatgccccatttccgggtcattaatgtccgacccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aagcttgaacctcctaaggaatttctatgccccatttccgggtcattaatgtccgacccg 350
Query: 121 gttgtcgtctcttcgggtcaaacattcgagcgtctctccgttcaagtctgcaacgacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gttgtcgtctcttcgggtcaaacattcgagcgtctctccgttcaagtctgcaacgacttg 410
Query: 181 aagttctcacccaatctcaacggaacccgacccgatttctccaccgtcatccccaattta 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aagttctcacccaatctcaacggaacccgacccgatttctccaccgtcatccccaatttg 470
Query: 241 gccatcaaaaccaccatcctcaactggtgccgcaaatccgccaccccaccaccgtgcccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gccatcaaaaccaccatcctcaactggtgccgcaaatccgccaccccaccaccgtgcccg 530
Query: 301 cccgattactccgccgtcgagagcctggttcgtcaagcaatggcggcggagccgcaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 cccgattactccgccgtcgagagcctggttcgtcaagcaatggcggcggagccgcaagag 590
Query: 361 agtgttagggtttccgagaaggagctgctgaaggcggttgctgataacccggtgatgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agtgttagggtttccgagaaggagctgctgaaggcggttgctgataacccggtgatgata 650
Query: 421 ggtttctctcacgccgccactgaactgggtccgccccgggttaacgacttcaactccgcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ggtttctctcacgccgccactgaactgggtccgccccgggttaacgacttcaactccgcg 710
Query: 481 tcgtcgtc 488
||||||||
Sbjct: 711 tcgtcgtc 718