Miyakogusa Predicted Gene
- Lj1g3v0415370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0415370.1 Non Chatacterized Hit- tr|J3MX45|J3MX45_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G1,44.88,3e-19,DUF4228,Protein of unknown function
DUF4228,CUFF.25745.1
(537 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64221 weakly similar to UniRef100_Q53J17 Cluster: T10... 1065 0.0
gnl|LJGI|TC80177 similar to UniRef100_A7Q2I5 Cluster: Chromosome... 56 2e-07
>gnl|LJGI|TC64221 weakly similar to UniRef100_Q53J17 Cluster: T10O24.15, related;
n=1; Solanum lycopersicum|Rep: T10O24.15, related -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum),
partial (74%)
Length = 872
Score = 1065 bits (537), Expect = 0.0
Identities = 537/537 (100%)
Strand = Plus / Plus
Query: 1 atggggaattgccaagctattgatgctgcaacaatagtgattcaacaccctaatggtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atggggaattgccaagctattgatgctgcaacaatagtgattcaacaccctaatggtaaa 168
Query: 61 gtagaaaggttttactcacctatgagcgcacgcctagttatgaaaatgaaccctgctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gtagaaaggttttactcacctatgagcgcacgcctagttatgaaaatgaaccctgctcat 228
Query: 121 tatgttgcccttctcatctccaccagcacattgtctccaaacaaggacattggtaactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tatgttgcccttctcatctccaccagcacattgtctccaaacaaggacattggtaactgc 288
Query: 181 cccaataagaatagtgacaccaacaccaacaacacatacccagttcgcttaactcgcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 cccaataagaatagtgacaccaacaccaacaacacatacccagttcgcttaactcgcata 348
Query: 241 aagcttctcaagcccaatgattccctccttctaggccatgtttatagactcatcacagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aagcttctcaagcccaatgattccctccttctaggccatgtttatagactcatcacagct 408
Query: 301 caagaggtaatgaagggcctaaaggaaaggaaacaagcaaagatgaagcagaatatgccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caagaggtaatgaagggcctaaaggaaaggaaacaagcaaagatgaagcagaatatgccg 468
Query: 361 gggtcaggtcacaagtcagattgggtgaagggaaaaattggattggagatggacaacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gggtcaggtcacaagtcagattgggtgaagggaaaaattggattggagatggacaacaaa 528
Query: 421 gcagaaagaagattagacacagaggacaacaaggtaaccaaacctgaaaaacctcgacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gcagaaagaagattagacacagaggacaacaaggtaaccaaacctgaaaaacctcgacca 588
Query: 481 aggacaagattttggcaaccctctttacagagcatctcagaggtagttggataatca 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aggacaagattttggcaaccctctttacagagcatctcagaggtagttggataatca 645
>gnl|LJGI|TC80177 similar to UniRef100_A7Q2I5 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 620
Score = 56.0 bits (28), Expect = 2e-07
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 218 acccagttcgcttaactcgcataaagcttctcaagcccaatgattccctccttctaggcc 277
||||||||||| | || ||||| || ||||||||||| | ||| |||| | || ||||
Sbjct: 58 acccagttcgccttacccgcatcaaacttctcaagccaacagatacccttgtgcttggcc 117
Query: 278 atgtttatagactcatcacagctcaagaggtaatgaaggg 317
| || |||||||||||| |||| |||||||| ||||||||
Sbjct: 118 aagtatatagactcatctcagcgcaagaggttatgaaggg 157