Miyakogusa Predicted Gene

Lj1g3v0415000.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0415000.1 Non Chatacterized Hit- tr|D7MMX4|D7MMX4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,47.29,5e-19,seg,NULL; NHL REPEAT-CONTAINING PROTEIN,NULL;
FAMILY NOT NAMED,NULL,CUFF.25710.1
         (457 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO011911 similar to UniRef100_A7PD39 Cluster: Chromosom...   367   e-101
gnl|LJGI|TC58770 similar to UniRef100_Q67UK6 Cluster: NHL repeat...    52   3e-06

>gnl|LJGI|GO011911 similar to UniRef100_A7PD39 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 423

 Score =  367 bits (185), Expect = e-101
 Identities = 188/189 (99%)
 Strand = Plus / Plus

                                                                       
Query: 269 gcggcagtagttcacggcacgctggaaagtaccaatacgaccccttgagttacgcgttga 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gcggcagtagttcacggcacgctggaaagtaccaatacgaccccttgagttacgcgttga 61

                                                                       
Query: 329 atttcgatgagggtccggggcaaaacggggatttcgaagatgacgttgtttctgatgggt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  atttcgatgagggtccggggcaaaacggggatttcgaagatgacgttgtttctgatgggt 121

                                                                       
Query: 389 ttcggaatttctccgcccgttatgctatggctcctcctttgagacaagacgtcgtcgttt 448
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 122 ttcggaatttctccgcccgttatgctatagctcctcctttgagacaagacgtcgtcgttt 181

                    
Query: 449 ctggttgag 457
           |||||||||
Sbjct: 182 ctggttgag 190


>gnl|LJGI|TC58770 similar to UniRef100_Q67UK6 Cluster: NHL repeat-containing
           protein-like; n=1; Oryza sativa Japonica Group|Rep: NHL
           repeat-containing protein-like - Oryza sativa subsp.
           japonica (Rice), partial (21%)
          Length = 992

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 202 gagtggtcggagatcgtagcggggccacgctggaagacgttcatccggcggttcagcc 259
           ||||||||||||||| ||||||| ||  | |||||||| |||||||| ||| ||||||
Sbjct: 286 gagtggtcggagatcttagcgggccccagatggaagacattcatccgccggctcagcc 343