Miyakogusa Predicted Gene
- Lj1g3v0411490.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0411490.2 Non Chatacterized Hit- tr|H9BA64|H9BA64_EIMTE
Putative uncharacterized protein OS=Eimeria tenella
PE,28.47,4e-18,RING/U-box,NULL; Ring finger,Zinc finger, RING-type; no
description,Zinc finger, RING/FYVE/PHD-type;,CUFF.25740.2
(894 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81488 similar to UniRef100_A7PD18 Cluster: Chromosome... 767 0.0
gnl|LJGI|TC70867 similar to UniRef100_A7PD18 Cluster: Chromosome... 444 e-124
gnl|LJGI|TC64170 similar to UniRef100_A7PD18 Cluster: Chromosome... 353 1e-96
gnl|LJGI|BW600086 similar to UniRef100_A7PD18 Cluster: Chromosom... 165 6e-40
gnl|LJGI|DC593902 homologue to UniRef100_A7PD18 Cluster: Chromos... 74 2e-12
>gnl|LJGI|TC81488 similar to UniRef100_A7PD18 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (73%)
Length = 963
Score = 767 bits (387), Expect = 0.0
Identities = 725/841 (86%), Gaps = 15/841 (1%)
Strand = Plus / Plus
Query: 8 tcagaggagtctatttcaaatggtacgatggctttttcttgtccatgctcgccatcagtg 67
||||||| ||| ||||||| ||||||||||| |||||||||||||||||||| | |||||
Sbjct: 116 tcagaggcgtcgatttcaagtggtacgatgggtttttcttgtccatgctcgcaaccagtg 175
Query: 68 tagctattgtggctattaattggaagcggtaccattcgtgtgctcacccgttgcacattt 127
||| |||||| || || ||||||||||| |||||||| ||| | |||| |||||||| |
Sbjct: 176 tagttattgttgcaatgaattggaagcgttaccattcttgtacataccctttgcacatat 235
Query: 128 ggattgtggttcactacactactgtttttgttttccgggttttgatgtttgttgataatg 187
|||||||||| ||||||||||||| |||||||| || | ||||||||||| |||||||
Sbjct: 236 ggattgtggtggactacactactgtgtttgttttgaggctcttgatgtttgtggataatg 295
Query: 188 gccttgcttcgggaatgggtttagattttgggtggcagcagaggtatgctcgattttgtg 247
| |||||| |||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct: 296 ggcttgctgcgggaatgggattagattttgggtggcagcagaggtatgctcgtttctgtg 355
Query: 248 gaagagtagttgtgctttcaatcctttcaatgcttttctacccatttctttgggcttgga 307
|||||||||| || |||||| ||||| || ||||| |||| |||||||||||||||||||
Sbjct: 356 gaagagtagtagtcctttcagtccttgcattgcttctctatccatttctttgggcttgga 415
Query: 308 caataactggtaccctgtggttcaacaattctaaaacctgtttgcctggactgggtcaga 367
| || | ||||||||||||||| | || ||| || | ||||||||||| || ||||||||
Sbjct: 416 ctattattggtaccctgtggtttagcagttccaagaactgtttgcctgaacagggtcaga 475
Query: 368 aatggggcttcctcatctggttactttttagctactgtggtctcctttgtattgctagcc 427
|||||| ||||||||||||||| ||||||||||||||||| ||| |||| |||||| ||
Sbjct: 476 aatgggccttcctcatctggttgctttttagctactgtggactcttttgcattgcttgca 535
Query: 428 tgtcaatcaggaagt---------------ggttgacacggagacaagcatatttgttag 472
| ||| | |||||| ||| |||||||||||||||| | || ||
Sbjct: 536 tctcacttgggaagtttaacactttgcagtggtggacacggagacaagcacacttattgc 595
Query: 473 atgcccaacaggggattcctgtatccgaatatggggttctaattgaaatgatccgagtgc 532
||||||||||| || |||||||| ||||| |||||||| |||| |||||||| || |
Sbjct: 596 gggcccaacagggtatccctgtatctgaatacggggttctggttgatatgatccgcgttc 655
Query: 533 cagattgggcatttgaagctgcaggtcaagaaacaaggggcatgggccaagatgttactc 592
| ||||||||||||||||||||||||||||||||||| | ||||| |||||||| | |
Sbjct: 656 ctgattgggcatttgaagctgcaggtcaagaaacaagagtcatggcccaagatgctgcca 715
Query: 593 catatcatcctggaatttacctaactccagctcagagagaagcagttgaagctttaattc 652
||||||| || ||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 716 catatcaaccaggactttacttaactccagctcagagagaagcagttgaagctttaattc 775
Query: 653 aggaactcccaaagttcagtttaaaagctgttcctactgattgcagtgaatgtctcgttt 712
||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 776 aggaactcccaaagttcaggttaaaggctgttcctactgattgcagtgaatgtcccgtct 835
Query: 713 gcttagaagagttccatgaagggaatgaggtccgtggcctgccgtgtgctcacaattttc 772
|||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||
Sbjct: 836 gcttagaagagttccatgaagggaatgaggtccgtggcttgccttgcgctcacaattttc 895
Query: 773 atgtagaatgcattgacgagtggcttcgactgaatgtgaaatgccctcggtgccgctgct 832
|||| ||||||||||| ||||||||| | |||||||||||||| ||||||||||| ||||
Sbjct: 896 atgttgaatgcattgatgagtggcttaggctgaatgtgaaatgtcctcggtgccgatgct 955
Query: 833 c 833
|
Sbjct: 956 c 956
>gnl|LJGI|TC70867 similar to UniRef100_A7PD18 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 881
Score = 444 bits (224), Expect = e-124
Identities = 458/536 (85%)
Strand = Plus / Plus
Query: 8 tcagaggagtctatttcaaatggtacgatggctttttcttgtccatgctcgccatcagtg 67
||||||| ||| ||||||| ||||||||||| |||||||||||||||||||| | |||||
Sbjct: 346 tcagaggcgtcgatttcaagtggtacgatgggtttttcttgtccatgctcgcaaccagtg 405
Query: 68 tagctattgtggctattaattggaagcggtaccattcgtgtgctcacccgttgcacattt 127
||| |||||| || || ||||||||||| |||||||| ||| | |||| |||||||| |
Sbjct: 406 tagttattgttgcaatgaattggaagcgttaccattcttgtacataccctttgcacatat 465
Query: 128 ggattgtggttcactacactactgtttttgttttccgggttttgatgtttgttgataatg 187
|||||||||| ||||||||||||| |||||||| || | ||||||||||| |||||||
Sbjct: 466 ggattgtggtggactacactactgtgtttgttttgaggctcttgatgtttgtggataatg 525
Query: 188 gccttgcttcgggaatgggtttagattttgggtggcagcagaggtatgctcgattttgtg 247
| |||||| |||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct: 526 ggcttgctgcgggaatgggattagattttgggtggcagcagaggtatgctcgtttctgtg 585
Query: 248 gaagagtagttgtgctttcaatcctttcaatgcttttctacccatttctttgggcttgga 307
|||||||||| || |||||| ||||| || ||||| |||| |||||||||||||||||||
Sbjct: 586 gaagagtagtagtcctttcagtccttgcattgcttctctatccatttctttgggcttgga 645
Query: 308 caataactggtaccctgtggttcaacaattctaaaacctgtttgcctggactgggtcaga 367
| || | ||||||||||||||| | || ||| || | ||||||||||| || ||||||||
Sbjct: 646 ctattattggtaccctgtggtttagcagttccaagaactgtttgcctgaacagggtcaga 705
Query: 368 aatggggcttcctcatctggttactttttagctactgtggtctcctttgtattgctagcc 427
|||||| ||||||||||||||| ||||||||||||||||| ||| |||| |||||| ||
Sbjct: 706 aatgggccttcctcatctggttgctttttagctactgtggactcttttgcattgcttgca 765
Query: 428 tgtcaatcaggaagtggttgacacggagacaagcatatttgttagatgcccaacagggga 487
| ||| | ||||||||| |||||||||||||||| | || || |||| |||||| |
Sbjct: 766 tctcacttgggaagtggtggacacggagacaagcacacttattgcgggcccgacagggta 825
Query: 488 ttcctgtatccgaatatggggttctaattgaaatgatccgagtgccagattgggca 543
| |||||||| ||||| |||||||| |||| |||||||| || || |||||||||
Sbjct: 826 tccctgtatctgaatacggggttctggttgatatgatccgcgttcctgattgggca 881
>gnl|LJGI|TC64170 similar to UniRef100_A7PD18 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 839
Score = 353 bits (178), Expect = 1e-96
Identities = 229/246 (93%)
Strand = Plus / Plus
Query: 624 tcagagagaagcagttgaagctttaattcaggaactcccaaagttcagtttaaaagctgt 683
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2 tcagagagaagcagttgaagctttaattcaggaactcccaaagttcaggttaaaggctgt 61
Query: 684 tcctactgattgcagtgaatgtctcgtttgcttagaagagttccatgaagggaatgaggt 743
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 62 tcctactgattgcagtgaatgtcccgtctgcttagaagagttccatgaagggaatgaggt 121
Query: 744 ccgtggcctgccgtgtgctcacaattttcatgtagaatgcattgacgagtggcttcgact 803
||||||| |||| || ||||||||||||||||| ||||||||||| ||||||||| | |
Sbjct: 122 ccgtggcttgccttgcgctcacaattttcatgttgaatgcattgatgagtggcttaggtt 181
Query: 804 gaatgtgaaatgccctcggtgccgctgctcagtatttccaaatcttgatctcagtgctct 863
|||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 182 gaatgtgaaatgtcctcggtgccgatgctcggtgtttccaaatcttgatctcagtgccct 241
Query: 864 gtccaa 869
||||||
Sbjct: 242 gtccaa 247
>gnl|LJGI|BW600086 similar to UniRef100_A7PD18 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 475
Score = 165 bits (83), Expect = 6e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 69 agctattgtggctattaattggaagcggtaccattcgtgtgctcacccgttgcacatttg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agctattgtggctattaattggaagcggtaccattcgtgtgctcacccgttgcacatttg 452
Query: 129 gattgtggttcactacactactg 151
|||||||||||||||||||||||
Sbjct: 453 gattgtggttcactacactactg 475
>gnl|LJGI|DC593902 homologue to UniRef100_A7PD18 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 565
Score = 73.8 bits (37), Expect = 2e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 8 tcagaggagtctatttcaaatggtacgatggctttttcttgtccatgctcgccatcagtg 67
||||||| ||| ||||||| ||||||||||| |||||||||||||||||||| | |||||
Sbjct: 277 tcagaggcgtcgatttcaagtggtacgatgggtttttcttgtccatgctcgcaaccagtg 336
Query: 68 t 68
|
Sbjct: 337 t 337