Miyakogusa Predicted Gene
- Lj1g3v0411360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0411360.1 tr|G7J5H8|G7J5H8_MEDTR Protein EXECUTER
OS=Medicago truncatula GN=MTR_3g078020 PE=4
SV=1,76.9,0,coiled-coil,NULL; seg,NULL; DUF3506,Protein of unknown
function DUF3506,CUFF.25683.1
(1926 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO025629 similar to UniRef100_A7PD17 Cluster: Chromosom... 1088 0.0
gnl|LJGI|AV417875 similar to UniRef100_A7PD17 Cluster: Chromosom... 581 e-165
gnl|LJGI|TC74558 similar to UniRef100_A7PD17 Cluster: Chromosome... 230 3e-59
>gnl|LJGI|GO025629 similar to UniRef100_A7PD17 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 762
Score = 1088 bits (549), Expect = 0.0
Identities = 621/646 (96%), Gaps = 6/646 (0%)
Strand = Plus / Plus
Query: 1 atggtggtcatggtgggtgtgtctcaatccatctctgtctcttcccagctcagaacccnn 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atggtggtcatggtgggtgtgtctcaatccatctctgtctcttcccagctcagaacccct 174
Query: 61 nnnnnnnnnnnnnnnnnngatttccacccaaagaagccaccaccaacctctcttctgggt 120
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tcttcttcttccttc---gatttccacccaaagaagccaccaccaacctctcttctgggt 231
Query: 121 tggcccaaccctcttcaacccaccccttcaatcttcttcagaaggaaccgcaccctccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tggcccaaccctcttcaacccaccccttcaatcttcttcagaaggaaccgcaccctccca 291
Query: 181 ctccactgttgccgctgcaccccagattccaacgatgccactgtcaactgggattggaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ctccactgttgccgctgcaccccagattccaacgatgccactgtcaactgggattggaac 351
Query: 241 cgatggtgctgccatttctctgaaattgaacaggctgagagcttcgcctctgttctcaag 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 352 cgatggtgctgccatttctctgaagttgaacaggctgagagcttcgcctctgttctcaag 411
Query: 301 tttcaacttgaagaagctattgaaaaggaagatttccaagaagcagtgaagttgaagagg 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 412 tttcaacttgaagaagctattgaaaaggaagatttccaagaggcagtgaagttgaagagg 471
Query: 361 gccatagcagaagcaacatccaaggacagtgttgctgaaattatgtctcagttgaagaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gccatagcagaagcaacatccaaggacagtgttgctgaaattatgtctcagttgaagaat 531
Query: 421 gccatagatgacgagcgctaccatgatgcatcaaagttatgtagatacactggaagtgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gccatagatgacgagcgctaccatgatgcatcaaagttatgtagatacactggaagtgga 591
Query: 481 ctggtgggttggt-gggtggggtgctcaaaagattcagaggacccctttggtagaataat 539
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ctggtgggttggtggggtggggtgctcaaaagattcagaggacccctttggtagaataat 651
Query: 540 tcatataagtcctggtatgggtagattcattgccaagagctacagtccaagacagttgct 599
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 652 tcatataagtcctggtatgggtagattcattgccaagagctacagtcc-agacagttgct 710
Query: 600 gacagcatcttctgggagaccaatatttgaaatctacgtggtaaaa 645
||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 711 gacagcatcttctgggagacc-atatttgaaatctacgtggtaaaa 755
>gnl|LJGI|AV417875 similar to UniRef100_A7PD17 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 314
Score = 581 bits (293), Expect = e-165
Identities = 307/314 (97%)
Strand = Plus / Plus
Query: 1253 aagttgccaatattaaagtggcagctctagcagcacaaggaatttcagagcttatgcctc 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttgccaatattaaagtggcagctctagcagcacaaggaatttcagagcttatgcctc 60
Query: 1313 cagaagttgctaaggcattttggaattctgacaaagtctcctctaaggtttccaaaagta 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagaagttgctaaggcattttggaattctgacaaagtctcctctaaggtttccaaaagta 120
Query: 1373 tacgtgaaattctcaaacttgctgttagtcaagcacagnnnnnnngtagattaacagagg 1432
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 tacgtgaaattctcaaacttgctgttagtcaagcacagaaaaaaagtagattaacagagg 180
Query: 1433 atacatgttttagccggattaccagttcaagaggggattttgatcctttcgatggactct 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atacatgttttagccggattaccagttcaagaggggattttgatcctttcgatggactct 240
Query: 1493 atgttggtgcatttggtcctcatggcattgaaatagtgcaattgaagagaaaatttggac 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgttggtgcatttggtcctcatggcattgaaatagtgcaattgaagagaaaatttggac 300
Query: 1553 attggaatgatgta 1566
||||||||||||||
Sbjct: 301 attggaatgatgta 314
>gnl|LJGI|TC74558 similar to UniRef100_A7PD17 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 524
Score = 230 bits (116), Expect = 3e-59
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 1811 aactcaatggcaggggcatgggacaatacttgaaaggtgcagatcttggtttcctttatg 1870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactcaatggcaggggcatgggacaatacttgaaaggtgcagatcttggtttcctttatg 60
Query: 1871 ctgtacctgagcaaagttttcttgtgctgttcaaccggttgaaactacctgagtga 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtacctgagcaaagttttcttgtgctgttcaaccggttgaaactacctgagtga 116