Miyakogusa Predicted Gene
- Lj1g3v0411300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0411300.1 Non Chatacterized Hit- tr|K3XHG0|K3XHG0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001331,43.9,8e-19,seg,NULL; DUF588,Uncharacterised protein family
UPF0497, trans-membrane plant,CUFF.25678.1
(846 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AU251526 weakly similar to UniRef100_P09125 Cluster: Me... 720 0.0
gnl|LJGI|TC62108 similar to UniRef100_A7PD16 Cluster: Chromosome... 218 4e-56
gnl|LJGI|TC73856 similar to UniRef100_P09789 Cluster: Glycine-ri... 52 6e-06
>gnl|LJGI|AU251526 weakly similar to UniRef100_P09125 Cluster: Merozoite surface
protein CMZ-8; n=1; Eimeria acervulina|Rep: Merozoite
surface protein CMZ-8 - Eimeria acervulina, partial
(12%)
Length = 371
Score = 720 bits (363), Expect = 0.0
Identities = 369/371 (99%)
Strand = Plus / Plus
Query: 71 ctcagttcgaatcgccgcaccatttttcctctccgactctatgggtacccgaatcgaccg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcagttcgaatcgccgcaccatttttcctctccgactctatgggtacccgaatcgaccg 60
Query: 131 agtcgccggagtatcggtcacctcagaactcaccgggagtgtgggtcgacaattcgttgg 190
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtcgccagagtatcggtcacctcagaactcaccgggagtgtgggtcgacaattcgttgg 120
Query: 191 cggtggtgccagtcaaaaagtccgctcccggtcccgggaaagcttcggagcgccagaagc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggtggtgccagtcaaaaagtccgctcccggtcccgggaaagcttcggagcgccagaagc 180
Query: 251 cgccggagaacgcggcatcggcggcggtgactgtgttcaacccgacgacgacgagggagg 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgccggagaacgcggcatcggcggcggtgactgtgttcaacccgacgacgacgagggagg 240
Query: 311 agccccagcggccggcgacgaaggtgggagagcggagatcgagatcggctccggcagggt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 agccccagcggccggcgacgaaggtgggagagcggagatcgagatcggctccggcggggt 300
Query: 371 ggaaggcggaggaagtggtgaggaaggtggcgctagggtttcggctgagcgaggtggcgg 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaaggcggaggaagtggtgaggaaggtggcgctagggtttcggctgagcgaggtggcgg 360
Query: 431 tgtgtctgatt 441
|||||||||||
Sbjct: 361 tgtgtctgatt 371
>gnl|LJGI|TC62108 similar to UniRef100_A7PD16 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1280
Score = 218 bits (110), Expect = 4e-56
Identities = 347/426 (81%)
Strand = Plus / Plus
Query: 390 gaggaaggtggcgctagggtttcggctgagcgaggtggcggtgtgtctgatttcgttttc 449
||||||||| ||| ||||||| ||| |||||||||||| | ||||||||||||| || ||
Sbjct: 416 gaggaaggttgcgttagggttccggttgagcgaggtggtgctgtgtctgatttctttctc 475
Query: 450 ggttatggctgcggatcggactcaaggttggagtggcgattcctatgatcgttacaaaga 509
||| |||||||| ||| |||||||||||||||||| || || | |||||| ||||| ||
Sbjct: 476 ggtgatggctgctgataagactcaaggttggagtggtgactcttttgatcgctacaagga 535
Query: 510 gtacaggtattgtttatgtatgaatgtgataggatttgcacactcaggattacaagtatg 569
|||||||| ||||| | | ||||||| || | ||||||| | ||| || |||| |||
Sbjct: 536 atacaggtactgtttgtctgtgaatgttattgcatttgcatatgcagcttttcaagcatg 595
Query: 570 tgatctggcatgtcagctagtcacagggaaacacataatcagccaccaccttcggtacca 629
|||||||| | ||| ||| | | |||| ||| |||||| |||||||| | | ||
Sbjct: 596 tgatctgggctatcaactatttgctgggagacaactaatcaatcaccacctgcactttca 655
Query: 630 ctttgatttcttcatggatcaggttctggcatatcttttgatatcagcatcatcctctgc 689
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||
Sbjct: 656 cttcgatttcttcatggatcaggttctagcatatcttttgatatcagcagcatcatctgc 715
Query: 690 agccacacgggtcgacgattggcaatcaaattgggggaaagacgagttcacagagatggc 749
||||| |||| || || ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 716 agccagcagggttgatgactggcaatcaaattggggaaaagatgagttcactgagatggc 775
Query: 750 cactgtttcagttgggatgtccttccttgcttttgctgcctttgccatgagctcactcat 809
| || |||| |||| || ||||||||||||| ||||||||| | |||||| | ||
Sbjct: 776 tagtgcttcaattggattggccttccttgctttcattgcctttgctgttagctcattaat 835
Query: 810 ctctgg 815
||||||
Sbjct: 836 ctctgg 841
>gnl|LJGI|TC73856 similar to UniRef100_P09789 Cluster: Glycine-rich cell wall
structural protein 1 precursor; n=1; Petunia x
hybrida|Rep: Glycine-rich cell wall structural protein 1
precursor - Petunia hybrida (Petunia), partial (9%)
Length = 518
Score = 52.0 bits (26), Expect = 6e-06
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 309 ggagccccagcggccggcgacgaaggtgggagagcggagatcgagatcgg 358
||||||||| |||| ||||||||||||||| || ||||||| ||||||||
Sbjct: 114 ggagccccaacggctggcgacgaaggtgggggaacggagat-gagatcgg 162