Miyakogusa Predicted Gene

Lj1g3v0410150.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0410150.1 Non Chatacterized Hit- tr|A5BMW2|A5BMW2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,59.49,2e-18,TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratricopeptide repeat-containing domain;
TPR_1,Tetratric,NODE_32486_length_1436_cov_124.977020.path2.1
         (1474 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68201 similar to UniRef100_A7PD12 Cluster: Chromosome...  1132   0.0  
gnl|LJGI|BP066990 similar to UniRef100_A7PD12 Cluster: Chromosom...   281   6e-75

>gnl|LJGI|TC68201 similar to UniRef100_A7PD12 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 629

 Score = 1132 bits (571), Expect = 0.0
 Identities = 580/583 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccggggattgttacaaatggggtttgtgatggggcagtgaatgagatgaatggtaac 60
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  atgccggggattgttacccatggggtttgtgatggggcagtgaatgagatgaatggtaac 106

                                                                       
Query: 61  cattcaccctcaaaggaaaccttagctccagtcaagtcccctaggggttccctgagtcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 cattcaccctcaaaggaaaccttagctccagtcaagtcccctaggggttccctgagtcca 166

                                                                       
Query: 121 cagagaggccagaatggaggacctaatttcccagttgatggggtgattgagccgtcgatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cagagaggccagaatggaggacctaatttcccagttgatggggtgattgagccgtcgatt 226

                                                                       
Query: 181 gagcagctctatgaaaatgtgtgtgacatgcagagttctgatcagtcaccctcaaggaaa 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 227 gagcagctctatgaaaatgtgtgtgacatgcacagttctgatcagtcaccctcaaggaaa 286

                                                                       
Query: 241 agttttggatctgatggtgatgagtctaggattgattcggagttgcgccagctagttgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 agttttggatctgatggtgatgagtctaggattgattcggagttgcgccagctagttgga 346

                                                                       
Query: 301 ggacggatgagggaggtggagataatggaagaggaagtggaagtcgaggtggaaaaagag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ggacggatgagggaggtggagataatggaagaggaagtggaagtcgaggtggaaaaagag 406

                                                                       
Query: 361 cggggagggagttctagtggtgaaatttcttctggagtgggtggtttatcatccaatgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cggggagggagttctagtggtgaaatttcttctggagtgggtggtttatcatccaatgaa 466

                                                                       
Query: 421 aagaagttggataaggtgcatgagattcaatctgcaactactagttctgtttccacagaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aagaagttggataaggtgcatgagattcaatctgcaactactagttctgtttccacagaa 526

                                                                       
Query: 481 aaatctgtcaaagcattgaactcacagttggatgcttcacctaaatcaaaacccaaagga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aaatctgtcaaagcattgaactcacagttggatgcttcacctaaatcaaaacccaaagga 586

                                                      
Query: 541 aaaagtcctcctgcaaaagctcctttggaaagaaagaatgata 583
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aaaagtcctcctgcaaaagctcctttggaaagaaagaatgata 629


>gnl|LJGI|BP066990 similar to UniRef100_A7PD12 Cluster: Chromosome chr17 scaffold_12,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr17 scaffold_12, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (26%)
          Length = 528

 Score =  281 bits (142), Expect = 6e-75
 Identities = 142/142 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1333 ggccaagaagtggaagtggcttctgttgactgcagcattggagacacatacttatccatg 1392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggccaagaagtggaagtggcttctgttgactgcagcattggagacacatacttatccatg 60

                                                                        
Query: 1393 tcccgatatgatgaggccgtcttcgcgtatgagaaagcgctaacagttttcaagactgga 1452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tcccgatatgatgaggccgtcttcgcgtatgagaaagcgctaacagttttcaagactgga 120

                                  
Query: 1453 aaaggagagaatcatcctgctg 1474
            ||||||||||||||||||||||
Sbjct: 121  aaaggagagaatcatcctgctg 142