Miyakogusa Predicted Gene
- Lj1g3v0399000.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0399000.2 Non Chatacterized Hit- tr|I1KCF5|I1KCF5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36211
PE,89.43,0,seg,NULL; ANION EXCHANGE PROTEIN-RELATED,NULL; ANION
EXCHANGE PROTEIN,Bicarbonate transporter, eukar,CUFF.25679.2
(2091 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61896 similar to UniRef100_A7PCZ0 Cluster: Chromosome... 1146 0.0
gnl|LJGI|TC73894 similar to UniRef100_A8MS82 Cluster: Uncharacte... 96 1e-18
gnl|LJGI|DC594801 homologue to UniRef100_A7NVV7 Cluster: Chromos... 66 1e-09
gnl|LJGI|GO025313 similar to UniRef100_A7P5N1 Cluster: Chromosom... 54 4e-06
>gnl|LJGI|TC61896 similar to UniRef100_A7PCZ0 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 813
Score = 1146 bits (578), Expect = 0.0
Identities = 578/578 (100%)
Strand = Plus / Plus
Query: 1514 ttgaaagcttgccaggaaatcagttttgggagagaatattgtatcttttcacagctccaa 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaaagcttgccaggaaatcagttttgggagagaatattgtatcttttcacagctccaa 60
Query: 1574 gtagaagatacaaactgctggaggagcatcatgccacctttgttgagactgtgcccttga 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtagaagatacaaactgctggaggagcatcatgccacctttgttgagactgtgcccttga 120
Query: 1634 aagcaattgccttatttactttgttccaaacattttacttgcttctttgctttggcttaa 1693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagcaattgccttatttactttgttccaaacattttacttgcttctttgctttggcttaa 180
Query: 1694 cgtggataccaattgctggggtccttttcccattgttaatcatgcttctcgtcccggtcc 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgtggataccaattgctggggtccttttcccattgttaatcatgcttctcgtcccggtcc 240
Query: 1754 ggcaatattttcttcccaagtttttcaaaggagcccatcttcaagagttggatgcagcag 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcaatattttcttcccaagtttttcaaaggagcccatcttcaagagttggatgcagcag 300
Query: 1814 catatgaggaagcacctgccattgctttcaacatgtcctttgaagatccaagtagccacg 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catatgaggaagcacctgccattgctttcaacatgtcctttgaagatccaagtagccacg 360
Query: 1874 gaactacagtgaatatcagtggtggggaaattcttgatgaaatcattacaaggagtcgtg 1933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaactacagtgaatatcagtggtggggaaattcttgatgaaatcattacaaggagtcgtg 420
Query: 1934 gcgagatacgtcgcactcaaagccccaaaacatcaagttcaactccaatttctacaggag 1993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgagatacgtcgcactcaaagccccaaaacatcaagttcaactccaatttctacaggag 480
Query: 1994 atataaggcctgctaatagccctctgagtaatggtactgagaggggaaagcggcctacga 2053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atataaggcctgctaatagccctctgagtaatggtactgagaggggaaagcggcctacga 540
Query: 2054 gcaactttgaaggagataaagttaatacaaaatcctag 2091
||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcaactttgaaggagataaagttaatacaaaatcctag 578
>gnl|LJGI|TC73894 similar to UniRef100_A8MS82 Cluster: Uncharacterized protein
At2g47160.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At2g47160.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (32%)
Length = 1127
Score = 95.6 bits (48), Expect = 1e-18
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 1477 acttcagtgctttggggttattttgccttcatggcaattgaaagcttgccaggaaatcag 1536
|||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 189 acttcagtactttggggctactttgcattcatggccattgaaagtttgccaggaaatcag 248
Query: 1537 ttttgggagagaatattgtatcttttcacagctccaagtagaagatacaaactgctggag 1596
|||||||| || || ||| || ||||| || ||||| ||||||||||| |||| |||
Sbjct: 249 ttttgggaaaggatcctgttactcttcactgcaccaagcagaagatacaaggtgcttgag 308
Query: 1597 gagcatcatgccacctttgt 1616
|| ||||||| || |||||
Sbjct: 309 gattatcatgctacttttgt 328
>gnl|LJGI|DC594801 homologue to UniRef100_A7NVV7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 503
Score = 65.9 bits (33), Expect = 1e-09
Identities = 132/165 (80%)
Strand = Plus / Plus
Query: 1668 ttacttgcttctttgctttggcttaacgtggataccaattgctggggtccttttcccatt 1727
|||||||||| |||| ||||| | |||||| | ||||| |||||||| || ||||||||
Sbjct: 102 ttacttgcttgtttgttttggtatcacgtgggtgccaatagctggggttctattcccatt 161
Query: 1728 gttaatcatgcttctcgtcccggtccggcaatattttcttcccaagtttttcaaaggagc 1787
| | ||||||||||| || || || | ||||| || | |||||||| |||||||| ||
Sbjct: 162 gatgatcatgcttctggttcctgtaagacaatacattttgcccaagttcttcaaaggggc 221
Query: 1788 ccatcttcaagagttggatgcagcagcatatgaggaagcacctgc 1832
|| ||||| || || ||||| |||| |||||| |||| ||||||
Sbjct: 222 acaccttcaggatttagatgctgcagaatatgaagaagtacctgc 266
>gnl|LJGI|GO025313 similar to UniRef100_A7P5N1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (25%)
Length = 579
Score = 54.0 bits (27), Expect = 4e-06
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 1468 aagataccaacttcagtgctttggggttattttgccttcatggcaattgaaagcttgcca 1527
||||||||||||||||| |||||||| || ||||| | |||||| ||||| || | |||
Sbjct: 474 aagataccaacttcagttctttggggatactttgcttacatggctattgatagtcttcca 533
Query: 1528 ggaaatcagttttgggagagaatattg 1554
|| ||||| || ||||| || ||||||
Sbjct: 534 gggaatcaattctgggaaaggatattg 560