Miyakogusa Predicted Gene

Lj1g3v0395870.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0395870.1 Non Chatacterized Hit- tr|I1KCE9|I1KCE9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48216
PE,77.18,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.25647.1
         (1002 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CB827165 similar to UniRef100_A7PCY1 Cluster: Chromosom...   708   0.0  
gnl|LJGI|TC70356 weakly similar to UniRef100_A7QP05 Cluster: Chr...    52   7e-06

>gnl|LJGI|CB827165 similar to UniRef100_A7PCY1 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 550

 Score =  708 bits (357), Expect = 0.0
 Identities = 363/365 (99%)
 Strand = Plus / Plus

                                                                       
Query: 327 gtggactttaacttcagtcaccatttactttgggcttggatctttgctctctatgcatgg 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gtggactttaacttcagtcaccatttactttgggcttggatctttgctctctatgcatgg 245

                                                                       
Query: 387 atgttaccaacatcataagaaagcgcgtggggataaggttgataatgtggatggagatgc 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atgttaccaacatcataagaaagcgcgtggggataaggttgataatgtggatggagatgc 305

                                                                       
Query: 447 agagaaaggaatgcataatgctcctgcaatccctccaggttctaatgcatctgaccaaga 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agagaaaggaatgcataatgctcctgcaatccctccaggttctaatgcatctgaccaaga 365

                                                                       
Query: 507 gaaaaacttgaaggccccagaaaaagatcctcttcgccaacttgcgggaacttggggtta 566
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gaaaaacttgaaggccccagaaaaagatcctcttcgccaacttgcgggaacttggggtta 425

                                                                       
Query: 567 tatttttcaaataatattccagatcaatgcaggtgctgttatgctcactgattgtgtatt 626
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tatttttcaaataatattccagatcaatgcaggtgctgttatgctcactgattgtgtatt 485

                                                                       
Query: 627 ttggttcataattgttccgtttcttaccatcaaagattacaatcttaattttttcatagt 686
           ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 486 ttggttcataattgttccgtttcttactatcaaagattacaatctaaattttttcatagt 545

                
Query: 687 cagca 691
           |||||
Sbjct: 546 cagca 550


>gnl|LJGI|TC70356 weakly similar to UniRef100_A7QP05 Cluster: Chromosome chr1
           scaffold_135, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_135, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (43%)
          Length = 714

 Score = 52.0 bits (26), Expect = 7e-06
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 560 ggggttatatttttcaaataatattccagatcaatgcaggtgctgttatgctcactga 617
           |||||||||||||||||||||| || ||||    ||||||||||||  ||||||||||
Sbjct: 1   ggggttatatttttcaaataatgtttcagacgtgtgcaggtgctgtagtgctcactga 58