Miyakogusa Predicted Gene

Lj1g3v0395790.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0395790.1 tr|A9S777|A9S777_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_181893,43.52,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.25641.1
         (396 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CB827165 similar to UniRef100_A7PCY1 Cluster: Chromosom...    68   4e-11

>gnl|LJGI|CB827165 similar to UniRef100_A7PCY1 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 550

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctcactgattgtgtattttggtttgtaattgttccatttctaaccaacagagattac 60
           ||||||||||||||||||||||||||  |||||||||| ||||| || | || |||||||
Sbjct: 466 atgctcactgattgtgtattttggttcataattgttccgtttcttactatcaaagattac 525

             
Query: 61  aa 62
           ||
Sbjct: 526 aa 527