Miyakogusa Predicted Gene

Lj1g3v0395740.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0395740.1 Non Chatacterized Hit- tr|F0VA97|F0VA97_NEOCL
Putative uncharacterized protein OS=Neospora caninum (,38.64,3,
,CUFF.25640.1
         (341 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS341186 similar to UniRef100_A3VVG5 Cluster: ABC trans...   151   3e-36

>gnl|LJGI|FS341186 similar to UniRef100_A3VVG5 Cluster: ABC transporter ATP-binding
           protein; n=1; Parvularcula bermudensis HTCC2503|Rep: ABC
           transporter ATP-binding protein - Parvularcula
           bermudensis HTCC2503, partial (5%)
          Length = 735

 Score =  151 bits (76), Expect = 3e-36
 Identities = 136/157 (86%), Gaps = 13/157 (8%)
 Strand = Plus / Plus

                                                                       
Query: 4   gcacaggtctcctatatgaatcgtccttccctatctccttgggttgtccagaaccttctc 63
           ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  gcacaagtctcctatctgcatcgtccttccctatctccttgggttgtccagaaccttctc 138

                                                                       
Query: 64  cccctaatagc------------cacctcccaagctattatttacacta-agcccaaaaa 110
           |||||||||||            || ||||||||||||||||||||||| |  |||||||
Sbjct: 139 cccctaatagccatctccgttctcatctcccaagctattatttacactataagccaaaaa 198

                                                
Query: 111 caacctatgttgtacttgtcctcttctatcccttttt 147
            |||||||| |||||||||||||||||||||||||||
Sbjct: 199 aaacctatgatgtacttgtcctcttctatcccttttt 235



 Score =  101 bits (51), Expect = 3e-21
 Identities = 88/101 (87%), Gaps = 7/101 (6%)
 Strand = Plus / Plus

                                                                       
Query: 229 tgcaaattccagctttccgatgtctttgacaggttgtgtgcctacactccctcccctaca 288
           |||||||||||| | ||||||||| |||||||||||| |||||||||       ||||||
Sbjct: 580 tgcaaattccagttgtccgatgtccttgacaggttgtatgcctacac-------cctaca 632

                                                    
Query: 289 ctccctcttcatcttctttacagcttgactgatttgatgga 329
           |||||||||||||||||||||||||| |||||||| |||||
Sbjct: 633 ctccctcttcatcttctttacagctttactgattttatgga 673