Miyakogusa Predicted Gene

Lj1g3v0365160.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0365160.1 Non Chatacterized Hit- tr|I1ITH5|I1ITH5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,49.53,2e-17,EF-hand, calcium binding motif,Calcium-binding
EF-hand; seg,NULL; no description,EF-hand-like domain,gene.g29365.t1.1
         (429 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO012401 weakly similar to UniRef100_Q9SCA1 Cluster: Ca...   565   e-161

>gnl|LJGI|GO012401 weakly similar to UniRef100_Q9SCA1 Cluster: Calcium-binding
           protein; n=1; Lotus japonicus|Rep: Calcium-binding
           protein - Lotus japonicus, partial (28%)
          Length = 585

 Score =  565 bits (285), Expect = e-161
 Identities = 319/329 (96%), Gaps = 1/329 (0%)
 Strand = Plus / Plus

                                                                       
Query: 74  aacatgagaatctccatgacagaaa-agaggttgatgatgttgttgtcaagttcgattct 132
           |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 6   aacatgagaatctccatgacaggaacagaggttgatgatgttgttgtcaagttcgattct 65

                                                                       
Query: 133 aatggagatgggttgctcgattttgatgagttttgcttgttgactatggcaatgagtgga 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  aatggagatgggttgctcgattttgatgagttttgcttgttgactatggcaatgagtgga 125

                                                                       
Query: 193 ggggatgagaaagagggtggtggagaagatgaagtagaggggaatttgaaggaagcattt 252
           || |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 126 ggagatgagaaagagggtggtggggaagatgaagtagaggggaatttgaaggaggctttt 185

                                                                       
Query: 253 gatgtgtttgataaagatgaagatgggttaatttcagtggaggagctggctctggttctt 312
           ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 186 gatgtgtttgataaagatgaagatgggttaacttcagtggaggagctggctctggtgctt 245

                                                                       
Query: 313 acttcgttgggattaagggaagggaagaagattgaagagtgcagagagatgattaagaag 372
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 acttctttgggattaagggaagggaagaagattgaagagtgcagagagatgattaagaag 305

                                        
Query: 373 gttgatatggatggagatggcatggtcaa 401
           |||||||||||||||||||| ||||||||
Sbjct: 306 gttgatatggatggagatggtatggtcaa 334