Miyakogusa Predicted Gene

Lj1g3v0342000.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0342000.1 Non Chatacterized Hit- tr|I1KCD5|I1KCD5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56981
PE,86.67,0,NAD(P)-binding Rossmann-fold domains,NULL; no
description,NAD(P)-binding domain; GDHRDH,Glucose/ribi,CUFF.25578.1
         (996 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU240158 similar to UniRef100_A7PCV0 Cluster: Chromosom...   192   3e-48
gnl|LJGI|TC58101 similar to UniRef100_A7QIY1 Cluster: Chromosome...    52   7e-06

>gnl|LJGI|AU240158 similar to UniRef100_A7PCV0 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 282

 Score =  192 bits (97), Expect = 3e-48
 Identities = 221/261 (84%), Gaps = 1/261 (0%)
 Strand = Plus / Plus

                                                                       
Query: 33  tgcaggccctagtggttttggctccaattcaactgctgagcaagttactcaaaattgctc 92
           |||||||||||||||||||||| | ||||||||||| |||||||| ||| || |||||||
Sbjct: 21  tgcaggccctagtggttttggc-cgaattcaactgcagagcaagtcactgaagattgctc 79

                                                                       
Query: 93  ttgctcccttccttcccatctaactgctctcatcactggggccagttctggtgttggagc 152
           || ||  || |||||  || |||| ||||| ||||| || || | ||||||| |||||||
Sbjct: 80  ttccttgctcccttcaaatttaacagctctgatcacaggagctacttctggtattggagc 139

                                                                       
Query: 153 tgaaacagcaagggtattagcaaagagaggagtgagagttgtgattggtgtgagggactt 212
           ||||||||||||||| ||||| ||||||||||| ||||||||||||||||  |||||| |
Sbjct: 140 tgaaacagcaagggtcttagccaagagaggagttagagttgtgattggtgccagggacat 199

                                                                       
Query: 213 gaggaaggggaaggaagtgataggcaatatatttaaggagagtccaaatgctgaggttat 272
           ||  ||||  | |||||||| ||| || ||  | |||||||||||||| |||||||||||
Sbjct: 200 gaaaaaggcaagggaagtgagaggaaaaatcctaaaggagagtccaaacgctgaggttat 259

                                
Query: 273 tctgttgaagattgatcttag 293
           ||| ||| |||||||||||||
Sbjct: 260 tctattggagattgatcttag 280


>gnl|LJGI|TC58101 similar to UniRef100_A7QIY1 Cluster: Chromosome chr2 scaffold_105,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_105, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 1852

 Score = 52.0 bits (26), Expect = 7e-06
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 342 tcttcctctcaatattctcataaacaatgcaggg 375
           |||||||||||||||||| || ||||||||||||
Sbjct: 348 tcttcctctcaatattcttattaacaatgcaggg 381