Miyakogusa Predicted Gene
- Lj1g3v0318460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0318460.1 tr|C1E0J5|C1E0J5_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_107758,29.23,0.000000000000004,seg,NULL,CUFF.25540.1
(1281 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79727 similar to UniRef100_A7QYY4 Cluster: Chromosome... 1459 0.0
gnl|LJGI|TC78448 similar to UniRef100_A7QYY4 Cluster: Chromosome... 638 0.0
>gnl|LJGI|TC79727 similar to UniRef100_A7QYY4 Cluster: Chromosome undetermined
scaffold_259, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_259,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (42%)
Length = 763
Score = 1459 bits (736), Expect = 0.0
Identities = 755/762 (99%), Gaps = 1/762 (0%)
Strand = Plus / Plus
Query: 39 tcctttgcaggttccgctagaaggcccccctaagacgggtttcgtagaacaaaatcttat 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tcctttgcaggttccgctagaaggcccccctaagacgggtttcgtagaacaaaatcttat 62
Query: 99 cctccggtgtcacgaaatgttttcttgctgcttctctatctcacacactcatcctcctct 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cctccggtgtcacgaaatgttttcttgctgcttctctatctcacacactcatcctcctct 122
Query: 159 aaacctcttcggtttcccttgtcgaacgttaactccctcccaccaccgccaccaccagct 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aaacctcttcggtttcccttgtcgaacgttaactccctcccaccaccgccaccaccagct 182
Query: 219 tcagttgaagcagcagcaacaacccaagagaatcattgtcttcagctacgaagtgggtgg 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcagttgaagcagcagcaacaacccaagagaatcattgtcttcagctacgaagtgggtgg 242
Query: 279 cggttacgccgcggaggaacaactccaccaccggaatgaaccagatattgatacttctgc 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cggttacgccgcggaggaacaactccaccaccggaatgaaccagatattgatacttctgc 302
Query: 339 ccagcgtgaggcacttctcaatggaggtgaacaagtcatctctgttctccaggaaatgat 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccagcgtgaggcacttctcaatggaggtgaacaagtcatctctgttctccaggaaatgat 362
Query: 399 tacccttttggaagaaatggatattcaagaagaagaatctgagaaagttgcagtggagct 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tacccttttggaagaaatggatattcaagaagaagaatctgagaaagttgcagtggagct 422
Query: 459 cgctgctcaaggagttattggaaagagagttgatcagatggagtctgatttcatgttggc 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cgctgctcaaggagttattggaaagagagttgatcagatggagtctgatttcatgttggc 482
Query: 519 tcttgattacatgattcagcttgctgagcaagaccaggatgataagcgcaagtcactgtt 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcttgattacatgattcagcttgctgagcaagaccaggatgataagcgcaagtcactgtt 542
Query: 579 ggaagttatcaaagagactgtattatcacatctaacnnnnnnntgtccgccccatgttca 638
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 543 ggaagttatcaaagagactgtattatcacatctaac-aaaaaatgtccgccccatgttca 601
Query: 639 agtaattggtcttctatgtagaactcccctaaaggaaagcagacatgaattactacgccg 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agtaattggtcttctatgtagaactcccctaaaggaaagcagacatgaattactacgccg 661
Query: 699 agttgcagccggtggtggagtttttaaaggcgaaaatgacttgaagattcacatcccagg 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agttgcagccggtggtggagtttttaaaggcgaaaatgacttgaagattcacatcccagg 721
Query: 759 ggcaaatcttaatgacatagctaaccaagctgatgatttagt 800
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ggcaaatcttaatgacatagctaaccaagctgatgatttagt 763
>gnl|LJGI|TC78448 similar to UniRef100_A7QYY4 Cluster: Chromosome undetermined
scaffold_259, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_259, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(27%)
Length = 612
Score = 638 bits (322), Expect = 0.0
Identities = 328/330 (99%)
Strand = Plus / Plus
Query: 952 aacttcttaaccaaattggtggctttaaaacctgggaaagtcgtgcttggaatgataaga 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacttcttaaccaaattggtggctttaaaacctgggaaagtcgtgcttggaatgataaga 60
Query: 1012 aatgtaatgcaaggaaaagatgaaggtgcagacaactctggccggagcgatgaagatgac 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgtaatgcaaggaaaagatgaaggtgcagacaactctggccggagcgatgaagatgac 120
Query: 1072 accacacatagggttacaagtggaattgctggaagggctagtgtgacaggacggaagcca 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accacacatagggttacaagtggaattgctggaagggctagtgtgacaggacggaagcca 180
Query: 1132 catccagtacgccctggcatgtttcttgagactgtctctaaggtcttgtctggtatatat 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catccagtacgccctggcatgtttcttgagactgtctctaaggtcttgtctggtatatat 240
Query: 1192 gcgggaaatgactctggcatcactgcacaacatctagaatgggttcatcaaaagacactt 1251
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 gcgggaaatgactctggcatcactgcacaacatctagaatgggttcatccaaagacactt 300
Query: 1252 caagtgcttcaggagatagcatttagctag 1281
| ||||||||||||||||||||||||||||
Sbjct: 301 ccagtgcttcaggagatagcatttagctag 330