Miyakogusa Predicted Gene

Lj1g3v0318250.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0318250.2 tr|Q9LYD2|Q9LYD2_ARATH At5g11600 OS=Arabidopsis
thaliana GN=F15N18_190 PE=2 SV=1,52.69,2e-19, ,CUFF.25528.2
         (297 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61977 similar to UniRef100_A7P574 Cluster: Chromosome...   161   3e-39

>gnl|LJGI|TC61977 similar to UniRef100_A7P574 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (65%)
          Length = 1330

 Score =  161 bits (81), Expect = 3e-39
 Identities = 132/149 (88%)
 Strand = Plus / Plus

                                                                       
Query: 36  acagaaagaacccctaaggattttctatgagtcattgtcaaaacaaatcccaccaagtga 95
           ||||||||||||||| ||| ||||||||||||||||||||||||| || ||| |||||||
Sbjct: 730 acagaaagaacccctgagggttttctatgagtcattgtcaaaacagataccaacaagtga 789

                                                                       
Query: 96  aatggcagaattctggttaatgcaacatgggttgctgccttctgaaagagctaagaaagc 155
           |||||| ||||| ||||||||| |||||||||||||| || |||| | ||| ||||||||
Sbjct: 790 aatggcggaattttggttaatggaacatgggttgctgtctcctgataaagcaaagaaagc 849

                                        
Query: 156 atttgataagaaacagaggaggcagaagg 184
           |||||| ||||| ||||||| ||| ||||
Sbjct: 850 atttgagaagaagcagaggaagcaaaagg 878