Miyakogusa Predicted Gene
- Lj1g3v0307940.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0307940.2 tr|G7J4A8|G7J4A8_MEDTR Thyroid
receptor-interacting protein OS=Medicago truncatula GN=MTR_3g076930
P,85.19,0,ATPases associated with a variety of cellula,AAA+ ATPase
domain; AAA,ATPase, AAA-type, core; P-loop ,CUFF.25509.2
(1392 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58723 similar to UniRef100_A7PCR4 Cluster: Chromosome... 1515 0.0
gnl|LJGI|TC69226 homologue to UniRef100_A7PCR4 Cluster: Chromoso... 1279 0.0
>gnl|LJGI|TC58723 similar to UniRef100_A7PCR4 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 809
Score = 1515 bits (764), Expect = 0.0
Identities = 764/764 (100%)
Strand = Plus / Plus
Query: 1 atgagtgctcccatggacacggagcaaaaccccacaaccacaatcgaccaaaacgccgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atgagtgctcccatggacacggagcaaaaccccacaaccacaatcgaccaaaacgccgtc 105
Query: 61 gcttcccaacactcacaacccgccgtcgcttctcaacactcaccacttccttctttcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gcttcccaacactcacaacccgccgtcgcttctcaacactcaccacttccttctttcatg 165
Query: 121 ttttccgaggacaaagttctcgtccctgttgaggtatgcttaaaaccttccagcacagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ttttccgaggacaaagttctcgtccctgttgaggtatgcttaaaaccttccagcacagct 225
Query: 181 ccaatcgaccatgtccgttcagccgttgaggggatgcttgaaaagaggagtttgagctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ccaatcgaccatgtccgttcagccgttgaggggatgcttgaaaagaggagtttgagctat 285
Query: 241 agtggaggacccattcccgttcccacggatgaaccgtttcttacagataacgtgcaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agtggaggacccattcccgttcccacggatgaaccgtttcttacagataacgtgcaaaga 345
Query: 301 atttgtgtttgtgatacagatgaagggatgcacgatgataatgttcttttgttctggcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atttgtgtttgtgatacagatgaagggatgcacgatgataatgttcttttgttctggcaa 405
Query: 361 gtcaaaccagttgtacacgtctttcagcttagcgaggaaggaccgtgcgaggatgtaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gtcaaaccagttgtacacgtctttcagcttagcgaggaaggaccgtgcgaggatgtaagc 465
Query: 421 tctgatggccagtcttctagcttcaatgagtggatgcttcctgcaaaagaatttgatggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tctgatggccagtcttctagcttcaatgagtggatgcttcctgcaaaagaatttgatggc 525
Query: 481 atgtgggaaagcttaatatatgaatctggcctaaagcaacgattgttacgttatgcagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 atgtgggaaagcttaatatatgaatctggcctaaagcaacgattgttacgttatgcagca 585
Query: 541 agtgctttgctctttactaaaaagggtgttgacccatttctagtttcatggaaccgcata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 agtgctttgctctttactaaaaagggtgttgacccatttctagtttcatggaaccgcata 645
Query: 601 gttcttttacatggacccccaggaactggaaagacgtctttatgcaaagcattagctcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gttcttttacatggacccccaggaactggaaagacgtctttatgcaaagcattagctcag 705
Query: 661 aaactatcaattcgattcaatttaagatacccacattgccagcttattgaagtgaatgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aaactatcaattcgattcaatttaagatacccacattgccagcttattgaagtgaatgca 765
Query: 721 cattctttgttcagtaaatggttctccgaaagtggcaagctggt 764
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 cattctttgttcagtaaatggttctccgaaagtggcaagctggt 809
>gnl|LJGI|TC69226 homologue to UniRef100_A7PCR4 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 801
Score = 1279 bits (645), Expect = 0.0
Identities = 645/645 (100%)
Strand = Plus / Plus
Query: 748 gaaagtggcaagctggtagcaaaactttttcaaaagattcaagaaatggtggaggaagaa 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaagtggcaagctggtagcaaaactttttcaaaagattcaagaaatggtggaggaagaa 60
Query: 808 ggcaatctagtatttgttttgattgatgaagttgaaagcctagctgctgcaagaaaagct 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcaatctagtatttgttttgattgatgaagttgaaagcctagctgctgcaagaaaagct 120
Query: 868 gccttatctggttctgaaccttcggattctattcgggttgtcaatgctttgctaactcag 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccttatctggttctgaaccttcggattctattcgggttgtcaatgctttgctaactcag 180
Query: 928 ctggacaagttaaaatcagctccaaatgtgataattctaaccacatccaacataactgct 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctggacaagttaaaatcagctccaaatgtgataattctaaccacatccaacataactgct 240
Query: 988 gccatcgatattgcttttgttgatcgagctgatatcaaagcatatgttggtcccccaact 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccatcgatattgcttttgttgatcgagctgatatcaaagcatatgttggtcccccaact 300
Query: 1048 cttcaagctcggtatgaaatattaaggtcttgcgtgcaggaactgatccgttcagggata 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcaagctcggtatgaaatattaaggtcttgcgtgcaggaactgatccgttcagggata 360
Query: 1108 ttagctagttttcaggattgtaagaatgtcatgcttccaaattatgctaacgcaaaggag 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttagctagttttcaggattgtaagaatgtcatgcttccaaattatgctaacgcaaaggag 420
Query: 1168 aggttgagcgcaccagattttcatgagcctgatgcatccattcaactgtgcaagcaacta 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggttgagcgcaccagattttcatgagcctgatgcatccattcaactgtgcaagcaacta 480
Query: 1228 cttgaaactgcagaggcatgtgagggaatgagtggaaggtctttgagaaagcttccattt 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttgaaactgcagaggcatgtgagggaatgagtggaaggtctttgagaaagcttccattt 540
Query: 1288 ctggcacatgctgcacttgcaaatccttttgattgcaaccctattaagttcttgtgtaaa 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctggcacatgctgcacttgcaaatccttttgattgcaaccctattaagttcttgtgtaaa 600
Query: 1348 atggtagaaacagcaaagcgggagcgttctgagcttcccgactaa 1392
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atggtagaaacagcaaagcgggagcgttctgagcttcccgactaa 645