Miyakogusa Predicted Gene

Lj1g3v0307940.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0307940.1 tr|G7J4A8|G7J4A8_MEDTR Thyroid
receptor-interacting protein OS=Medicago truncatula GN=MTR_3g076930
P,89.47,0,AAA,ATPase, AAA-type, core; P-loop containing nucleoside
triphosphate hydrolases,NULL; no descriptio,CUFF.25509.1
         (411 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69226 homologue to UniRef100_A7PCR4 Cluster: Chromoso...   656   0.0  

>gnl|LJGI|TC69226 homologue to UniRef100_A7PCR4 Cluster: Chromosome chr17
           scaffold_12, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (37%)
          Length = 801

 Score =  656 bits (331), Expect = 0.0
 Identities = 331/331 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtggaggaagaaggcaatctagtatttgttttgattgatgaagttgaaagcctagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  atggtggaggaagaaggcaatctagtatttgttttgattgatgaagttgaaagcctagct 105

                                                                       
Query: 61  gctgcaagaaaagctgccttatctggttctgaaccttcggattctattcgggttgtcaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gctgcaagaaaagctgccttatctggttctgaaccttcggattctattcgggttgtcaat 165

                                                                       
Query: 121 gctttgctaactcagctggacaagttaaaatcagctccaaatgtgataattctaaccaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gctttgctaactcagctggacaagttaaaatcagctccaaatgtgataattctaaccaca 225

                                                                       
Query: 181 tccaacataactgctgccatcgatattgcttttgttgatcgagctgatatcaaagcatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tccaacataactgctgccatcgatattgcttttgttgatcgagctgatatcaaagcatat 285

                                                                       
Query: 241 gttggtcccccaactcttcaagctcggtatgaaatattaaggtcttgcgtgcaggaactg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gttggtcccccaactcttcaagctcggtatgaaatattaaggtcttgcgtgcaggaactg 345

                                          
Query: 301 atccgttcagggatattagctagttttcagg 331
           |||||||||||||||||||||||||||||||
Sbjct: 346 atccgttcagggatattagctagttttcagg 376



 Score =  107 bits (54), Expect = 5e-23
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                 
Query: 358 aggattgtaagaatgtcatgcttccaaattatgctaacgcaaaggagaggttga 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aggattgtaagaatgtcatgcttccaaattatgctaacgcaaaggagaggttga 427