Miyakogusa Predicted Gene
- Lj1g3v0296910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0296910.1 tr|I1K051|I1K051_SOYBN Elongation factor Tu
OS=Glycine max GN=Gma.23178 PE=3 SV=1,85.36,0,GTP_EFTU,Elongation
factor, GTP-binding domain; GTP_EFTU_D3,Translation elongation factor
EFTu/EF1A,,CUFF.25513.1
(1449 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75349 homologue to UniRef100_Q43467 Cluster: Elongati... 1653 0.0
gnl|LJGI|TC72476 homologue to UniRef100_P46280 Cluster: Elongati... 1001 0.0
gnl|LJGI|TC73993 homologue to UniRef100_A7PCR2 Cluster: Chromoso... 569 e-161
gnl|LJGI|AV424343 similar to UniRef100_Q40450 Cluster: Elongatio... 224 1e-57
gnl|LJGI|TC78032 UniRef100_Q5UE86 Cluster: Ribulose-1,5-bisphosp... 54 3e-06
>gnl|LJGI|TC75349 homologue to UniRef100_Q43467 Cluster: Elongation factor Tu,
chloroplast precursor; n=1; Glycine max|Rep: Elongation
factor Tu, chloroplast precursor - Glycine max (Soybean),
partial (62%)
Length = 1129
Score = 1653 bits (834), Expect = 0.0
Identities = 834/834 (100%)
Strand = Plus / Plus
Query: 184 gcccgccgcaaccgctcttccttcaccgtccgcgccgcccgcggcaagttcgagcggaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gcccgccgcaaccgctcttccttcaccgtccgcgccgcccgcggcaagttcgagcggaag 355
Query: 244 aagccccacgtgaacatcggcacaatcggccacgtcgaccacggcaagaccaccctgacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aagccccacgtgaacatcggcacaatcggccacgtcgaccacggcaagaccaccctgacc 415
Query: 304 gccgccctcaccatggcgctcgcctccctcggcaacagcgcccccaagaagtacgacgag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gccgccctcaccatggcgctcgcctccctcggcaacagcgcccccaagaagtacgacgag 475
Query: 364 atcgacgctgcccctgaagagcgcgcccgcggcatcaccatcaacaccgccaccgtcgag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atcgacgctgcccctgaagagcgcgcccgcggcatcaccatcaacaccgccaccgtcgag 535
Query: 424 tacgagaccgagacgcgccactacgcacacgtcgactgccctggtcacgccgattatgtc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tacgagaccgagacgcgccactacgcacacgtcgactgccctggtcacgccgattatgtc 595
Query: 484 aagaacatgatcactggtgccgcccagatggacggcgccatcctcgtcgtctccggcgcc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aagaacatgatcactggtgccgcccagatggacggcgccatcctcgtcgtctccggcgcc 655
Query: 544 gacggccccatgccccaaaccaaagaacacatcctcctagccaaacaggttggtgtccct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gacggccccatgccccaaaccaaagaacacatcctcctagccaaacaggttggtgtccct 715
Query: 604 aacgtggttgtcttccttaacaagcaagaccaggttgacgacgaggagctccttgagctc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 aacgtggttgtcttccttaacaagcaagaccaggttgacgacgaggagctccttgagctc 775
Query: 664 gtggagctcgaggtccgggagcttctctcgtcctacgagtttcccggtgatgacatcccc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gtggagctcgaggtccgggagcttctctcgtcctacgagtttcccggtgatgacatcccc 835
Query: 724 atcacctctggctccgccctcctcgccctggaagctctcatggccaaccctgccatcaag 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 atcacctctggctccgccctcctcgccctggaagctctcatggccaaccctgccatcaag 895
Query: 784 cgtggtgagaacgattgggtcgacaagatttaccagctcatggacaatgttgatagctac 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 cgtggtgagaacgattgggtcgacaagatttaccagctcatggacaatgttgatagctac 955
Query: 844 atccccatccctcagcgccagaccgacctccccttcctccttgccattgaggatgtgttc 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 atccccatccctcagcgccagaccgacctccccttcctccttgccattgaggatgtgttc 1015
Query: 904 tccatcaccggtcgtgggaccgttgccacagggaggattgagaggggcaccatcaaagtc 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 tccatcaccggtcgtgggaccgttgccacagggaggattgagaggggcaccatcaaagtc 1075
Query: 964 ggtgacgtcgtcgaccttgtcggattaagagaaaccaggaacaccaccgtcacc 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 ggtgacgtcgtcgaccttgtcggattaagagaaaccaggaacaccaccgtcacc 1129
Score = 184 bits (93), Expect = 1e-45
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 33 agtaacagcagcagtttcatcaaaactagcaacccaacctccacatgcattttccacttc 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 agtaacagcagcagtttcatcaaaactagcaacccaacctccacatgcattttccacttc 204
Query: 93 catttccaccaccaaccacaagctaattacccg 125
|||||||||||||||||||||||||||||||||
Sbjct: 205 catttccaccaccaaccacaagctaattacccg 237
>gnl|LJGI|TC72476 homologue to UniRef100_P46280 Cluster: Elongation factor Tu,
chloroplast precursor; n=1; Glycine max|Rep: Elongation
factor Tu, chloroplast precursor - Glycine max (Soybean),
partial (88%)
Length = 1927
Score = 1001 bits (505), Expect = 0.0
Identities = 1057/1241 (85%)
Strand = Plus / Plus
Query: 206 tcaccgtccgcgccgcccgcggcaagttcgagcggaagaagccccacgtgaacatcggca 265
|||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||||
Sbjct: 364 tcaccgtccgcgccgctcgcggcaagttcgagcgcaagaaaccccatgtcaacatcggca 423
Query: 266 caatcggccacgtcgaccacggcaagaccaccctgaccgccgccctcaccatggcgctcg 325
| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 424 ccatcggccacgtcgaccacggcaaaaccaccctcaccgccgccctcaccatggccctcg 483
Query: 326 cctccctcggcaacagcgcccccaagaagtacgacgagatcgacgctgcccctgaagagc 385
| |||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 484 cttccctcggaaacagcgcccccaagaaatacgacgaaatcgacgccgcccctgaagagc 543
Query: 386 gcgcccgcggcatcaccatcaacaccgccaccgtcgagtacgagaccgagacgcgccact 445
|||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 544 gcgctcgcggtatcaccatcaacaccgccaccgtcgagtacgagaccgagaatcgccact 603
Query: 446 acgcacacgtcgactgccctggtcacgccgattatgtcaagaacatgatcactggtgccg 505
| || ||||| |||||||| || ||||| ||||| |||||||||||||| || |||||||
Sbjct: 604 atgctcacgttgactgccccggccacgctgattacgtcaagaacatgattaccggtgccg 663
Query: 506 cccagatggacggcgccatcctcgtcgtctccggcgccgacggccccatgccccaaacca 565
|||||||||||||||| || || || |||||||||||||||||||| ||||| || ||||
Sbjct: 664 cccagatggacggcgctattcttgttgtctccggcgccgacggccctatgccgcagacca 723
Query: 566 aagaacacatcctcctagccaaacaggttggtgtccctaacgtggttgtcttccttaaca 625
|||| ||||||||| | || || ||||||||||| |||||| |||| || ||||| ||||
Sbjct: 724 aagagcacatcctcttggcgaagcaggttggtgtacctaacatggtggttttcctcaaca 783
Query: 626 agcaagaccaggttgacgacgaggagctccttgagctcgtggagctcgaggtccgggagc 685
|||| ||||||||||| || |||||||| || | ||||| || | ||||| |||||||
Sbjct: 784 agcaggaccaggttgatgatgaggagcttctgcaactcgttgaattggaggttcgggagc 843
Query: 686 ttctctcgtcctacgagtttcccggtgatgacatccccatcacctctggctccgccctcc 745
|||| ||||| |||||||| || || ||||| | ||||| ||||| || |||||
Sbjct: 844 ttctatcgtcttacgagttccctggggatgatgttcccattgtttctggttctgcccttt 903
Query: 746 tcgccctggaagctctcatggccaaccctgccatcaagcgtggtgagaacgattgggtcg 805
| || || |||||||| ||||| |||||||| ||||| ||||||||||| | ||||| |
Sbjct: 904 tggctcttgaagctctaatggcgaaccctgctatcaaacgtggtgagaatcagtgggtgg 963
Query: 806 acaagatttaccagctcatggacaatgttgatagctacatccccatccctcagcgccaga 865
| |||||||| |||| ||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct: 964 ataagatttatgagcttatggataatgtggatagctacattcctatccctcagcgccaaa 1023
Query: 866 ccgacctccccttcctccttgccattgaggatgtgttctccatcaccggtcgtgggaccg 925
|||| || || || | ||||||||| |||||||| |||||||| |||||||| ||||
Sbjct: 1024 ccgatcttccgtttttgtgtgccattgaagatgtgttttccatcacgggtcgtggaaccg 1083
Query: 926 ttgccacagggaggattgagaggggcaccatcaaagtcggtgacgtcgtcgaccttgtcg 985
| ||||| ||| | ||||||||||| | || || |||||| || || |||| |
Sbjct: 1084 tggccaccgggcgtattgagagggggttggttaaggttggtgacacggttgagattgttg 1143
Query: 986 gattaagagaaaccaggaacaccaccgtcaccggagttgagatgttccagaagattcttg 1045
| | || ||||| |||| ||| || || || || || |||||||| ||||||||||| |
Sbjct: 1144 gtgttagggaaactaggaccactactgtgactggggtggagatgtttcagaagattctgg 1203
Query: 1046 acgacgcaatggctggggacaatgtggggttgttgctgaggggtattcagaagattgata 1105
| || || ||||||||||||| ||||||||||||||| ||||||||||||||| ||||||
Sbjct: 1204 atgatgccatggctggggacagtgtggggttgttgcttaggggtattcagaaggttgata 1263
Query: 1106 ttcagagagggatggttttggccaagcctggaaccatcacacctcacactaagtttgatg 1165
|||||||||||||||||||||| ||||||||||| || ||||| ||||| |||||| ||
Sbjct: 1264 ttcagagagggatggttttggctaagcctggaactattacaccacacaccaagttttctg 1323
Query: 1166 caattgtgtatattctgaagaaggaagaaggtgggagacactcacctttctttgcagggt 1225
| |||||||| | |||||||||||||||||||||| ||||| ||||||||||| || |
Sbjct: 1324 cgattgtgtacgtgttgaagaaggaagaaggtgggaggcactcgcctttctttgctggtt 1383
Query: 1226 acaggcctcagttctatatgagaaccactgatgttactggcaaggtcactgccatcatga 1285
||||||| |||||||| ||||| || |||||||| |||||||| ||||| ||||| ||||
Sbjct: 1384 acaggccacagttctacatgaggactactgatgtcactggcaaagtcacggccattatga 1443
Query: 1286 acgataaggatgaagagtccaagatggtgatgcccggtgaccgggttaagatggtggtgg 1345
| ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 1444 atgataaggatgaggagtccaagatggtgatgcccggagaccgtgttaagatggtggttg 1503
Query: 1346 aactcatcgtcccggtggcgtgtgagcaaggaatgaggtttgctattagggaaggaggga 1405
| || || || || ||||| ||||| || |||||||||||||||||||| |||||||| |
Sbjct: 1504 agcttattgttccagtggcttgtgaacagggaatgaggtttgctattagagaaggaggca 1563
Query: 1406 agactgttggagctggtgttatccaatctatcattgagtga 1446
| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 1564 aaactgttggagctggtgttatccaatcgatcattgagtga 1604
>gnl|LJGI|TC73993 homologue to UniRef100_A7PCR2 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 571
Score = 569 bits (287), Expect = e-161
Identities = 293/295 (99%)
Strand = Plus / Plus
Query: 1155 taagtttgatgcaattgtgtatattctgaagaaggaagaaggtgggagacactcaccttt 1214
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 taagtttgatgcaattgtgtatattttgaagaaggaagaaggtgggagacactcaccttt 60
Query: 1215 ctttgcagggtacaggcctcagttctatatgagaaccactgatgttactggcaaggtcac 1274
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttgcagggtacaggcctcagttctatatgagaaccactgatgttactggcaaggtcac 120
Query: 1275 tgccatcatgaacgataaggatgaagagtccaagatggtgatgcccggtgaccgggttaa 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgccatcatgaacgataaggatgaagagtccaagatggtgatgcccggtgaccgggttaa 180
Query: 1335 gatggtggtggaactcatcgtcccggtggcgtgtgagcaaggaatgaggtttgctattag 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatggtggtggaactcatcgtcccggtggcgtgtgagcaaggaatgaggtttgctattag 240
Query: 1395 ggaaggagggaagactgttggagctggtgttatccaatctatcattgagtgattc 1449
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaaggagggaagactgttggagctggtgttatccaatctatcattgagtgattc 295
>gnl|LJGI|AV424343 similar to UniRef100_Q40450 Cluster: Elongation factor TuA,
chloroplast precursor; n=2; Nicotiana|Rep: Elongation
factor TuA, chloroplast precursor - Nicotiana sylvestris
(Wood tobacco), partial (9%)
Length = 398
Score = 224 bits (113), Expect = 1e-57
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 184 gcccgccgcaaccgctcttccttcaccgtccgcgccgcccgcggcaagttcgagcggaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gcccgccgcaaccgctcttccttcaccgtccgcgccgcccgcggcaagttcgagcggaag 345
Query: 244 aagccccacgtgaacatcggcacaatcggccacgtcgaccacggcaagaccac 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aagccccacgtgaacatcggcacaatcggccacgtcgaccacggcaagaccac 398
Score = 184 bits (93), Expect = 1e-45
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 33 agtaacagcagcagtttcatcaaaactagcaacccaacctccacatgcattttccacttc 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 agtaacagcagcagtttcatcaaaactagcaacccaacctccacatgcattttccacttc 194
Query: 93 catttccaccaccaaccacaagctaattacccg 125
|||||||||||||||||||||||||||||||||
Sbjct: 195 catttccaccaccaaccacaagctaattacccg 227
>gnl|LJGI|TC78032 UniRef100_Q5UE86 Cluster: Ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit; n=2; Aralia|Rep:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit - Aralia gigantea, partial (42%)
Length = 450
Score = 54.0 bits (27), Expect = 3e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1416 agctggtgttatccaatctatcattgagtga 1446
|||||||||||||||||| ||||||||||||
Sbjct: 228 agctggtgttatccaatcgatcattgagtga 258