Miyakogusa Predicted Gene

Lj1g3v0270280.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0270280.1 Non Chatacterized Hit- tr|K4DDM9|K4DDM9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,48.1,0.000000005,Ring finger,Zinc finger, RING-type;
SNF2_N,SNF2-related; zf-C3HC4_2,NULL; seg,NULL; ZF_RING_2,Zinc
f,NODE_31535_length_3086_cov_12.616980.path1.1
         (1323 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68866 weakly similar to UniRef100_A7PTA3 Cluster: Chr...   101   1e-20

>gnl|LJGI|TC68866 weakly similar to UniRef100_A7PTA3 Cluster: Chromosome chr8
            scaffold_29, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 695

 Score =  101 bits (51), Expect = 1e-20
 Identities = 51/51 (100%)
 Strand = Plus / Plus

                                                               
Query: 1273 gttgtattttcagaatgtcttgaggtgcttagatttttgaagagcatctaa 1323
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gttgtattttcagaatgtcttgaggtgcttagatttttgaagagcatctaa 51