Miyakogusa Predicted Gene

Lj1g3v0268770.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0268770.1 tr|G7KHI2|G7KHI2_MEDTR MADS-box transcription
factor OS=Medicago truncatula GN=MTR_6g005440 PE=3
SV=,38.06,1e-16,coiled-coil,NULL,CUFF.25450.1
         (1072 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP081580                                                     192   3e-48

>gnl|LJGI|BP081580 
          Length = 354

 Score =  192 bits (97), Expect = 3e-48
 Identities = 126/133 (94%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                        
Query: 941  gcgggcttgaggattgggcttgtaaatttcctcagagggctaatcaaca-aggtggtgat 999
            |||||||||||||||||||||| ||||||||| |||| ||||||||||  ||||| ||||
Sbjct: 354  gcgggcttgaggattgggcttgcaaatttcctgagagagctaatcaacccaggtgatgat 295

                                                                        
Query: 1000 tttctgtggtggtttgatgaatctgatgaagatcttttccagaatactccttttcagttg 1059
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 294  tttctgtggtggtttgatgaatctgatgaagatcttttccagaatactcc-tttcagttg 236

                         
Query: 1060 caggatcaatgaa 1072
            |||||||||||||
Sbjct: 235  caggatcaatgaa 223



 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 571 gggcttgaggagtgggcttgcaaatttcttgagag 605
           ||||||||||| |||||||||||||||| ||||||
Sbjct: 352 gggcttgaggattgggcttgcaaatttcctgagag 318