Miyakogusa Predicted Gene
- Lj1g3v0250170.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0250170.1 tr|G4T6V1|G4T6V1_PIRID Probable
COX12-cytochrome-c oxidase, subunit VIB OS=Piriformospora indica
(st,46.51,4e-19,Q8LCP1_ARATH_Q8LCP1;,NULL; CYTOCHROME C OXIDASE
POLYPEPTIDE VIB,NULL; COX6B,Cytochrome c oxidase, su,CUFF.25413.1
(534 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58596 similar to UniRef100_A7Q424 Cluster: Chromosome... 1059 0.0
gnl|LJGI|TC64603 529 e-150
gnl|LJGI|TC67628 similar to UniRef100_A7PFI1 Cluster: Chromosome... 54 9e-07
>gnl|LJGI|TC58596 similar to UniRef100_A7Q424 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 893
Score = 1059 bits (534), Expect = 0.0
Identities = 534/534 (100%)
Strand = Plus / Plus
Query: 1 atggcggaacctgctgtcgaaaactctcctactctcgctgagcaatattatgtgaaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atggcggaacctgctgtcgaaaactctcctactctcgctgagcaatattatgtgaaggac 160
Query: 61 aagcaggaggaaaaagttgtagttgagaaacccgttgaagttaaagaagttgaaacccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aagcaggaggaaaaagttgtagttgagaaacccgttgaagttaaagaagttgaaacccct 220
Query: 121 aaagaggttgctcctgaggaaactgtggttgagaaaactgtggaagaaacaacacctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aaagaggttgctcctgaggaaactgtggttgagaaaactgtggaagaaacaacacctgtt 280
Query: 181 gcacctgcagttgtcgaggaaagcagtgaagtccccccttctgctgaagaaagcactgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gcacctgcagttgtcgaggaaagcagtgaagtccccccttctgctgaagaaagcactgaa 340
Query: 241 gtgcaaactagtgagagtgttgaagaagaaaactctggtgatcaagaagcagctgaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gtgcaaactagtgagagtgttgaagaagaaaactctggtgatcaagaagcagctgaagag 400
Query: 301 accccagaaattaagcttgagactgctccagtagatttccgttttccaactacaaatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 accccagaaattaagcttgagactgctccagtagatttccgttttccaactacaaatcaa 460
Query: 361 acaagacattgctttacccgatacattgaatatcatcgatgtgtagctgcaaaaggagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 acaagacattgctttacccgatacattgaatatcatcgatgtgtagctgcaaaaggagat 520
Query: 421 ggtgcacctgaatgtgacaagtttgcgaaatattatcgtgctctttgccctggtgaatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggtgcacctgaatgtgacaagtttgcgaaatattatcgtgctctttgccctggtgaatgg 580
Query: 481 gttgacagatggaatgaacaaagggagaatgggacattcccaggcccgctgtag 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gttgacagatggaatgaacaaagggagaatgggacattcccaggcccgctgtag 634
>gnl|LJGI|TC64603
Length = 962
Score = 529 bits (267), Expect = e-150
Identities = 267/267 (100%)
Strand = Plus / Plus
Query: 268 gaaaactctggtgatcaagaagcagctgaagagaccccagaaattaagcttgagactgct 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gaaaactctggtgatcaagaagcagctgaagagaccccagaaattaagcttgagactgct 523
Query: 328 ccagtagatttccgttttccaactacaaatcaaacaagacattgctttacccgatacatt 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ccagtagatttccgttttccaactacaaatcaaacaagacattgctttacccgatacatt 583
Query: 388 gaatatcatcgatgtgtagctgcaaaaggagatggtgcacctgaatgtgacaagtttgcg 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gaatatcatcgatgtgtagctgcaaaaggagatggtgcacctgaatgtgacaagtttgcg 643
Query: 448 aaatattatcgtgctctttgccctggtgaatgggttgacagatggaatgaacaaagggag 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aaatattatcgtgctctttgccctggtgaatgggttgacagatggaatgaacaaagggag 703
Query: 508 aatgggacattcccaggcccgctgtag 534
|||||||||||||||||||||||||||
Sbjct: 704 aatgggacattcccaggcccgctgtag 730
Score = 450 bits (227), Expect = e-126
Identities = 227/227 (100%)
Strand = Plus / Plus
Query: 1 atggcggaacctgctgtcgaaaactctcctactctcgctgagcaatattatgtgaaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 atggcggaacctgctgtcgaaaactctcctactctcgctgagcaatattatgtgaaggac 139
Query: 61 aagcaggaggaaaaagttgtagttgagaaacccgttgaagttaaagaagttgaaacccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 aagcaggaggaaaaagttgtagttgagaaacccgttgaagttaaagaagttgaaacccct 199
Query: 121 aaagaggttgctcctgaggaaactgtggttgagaaaactgtggaagaaacaacacctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aaagaggttgctcctgaggaaactgtggttgagaaaactgtggaagaaacaacacctgtt 259
Query: 181 gcacctgcagttgtcgaggaaagcagtgaagtccccccttctgctga 227
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcacctgcagttgtcgaggaaagcagtgaagtccccccttctgctga 306
Score = 329 bits (166), Expect = 1e-89
Identities = 166/166 (100%)
Strand = Plus / Plus
Query: 37 gctgagcaatattatgtgaaggacaagcaggaggaaaaagttgtagttgagaaacccgtt 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gctgagcaatattatgtgaaggacaagcaggaggaaaaagttgtagttgagaaacccgtt 361
Query: 97 gaagttaaagaagttgaaacccctaaagaggttgctcctgaggaaactgtggttgagaaa 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaagttaaagaagttgaaacccctaaagaggttgctcctgaggaaactgtggttgagaaa 421
Query: 157 actgtggaagaaacaacacctgttgcacctgcagttgtcgaggaaa 202
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 actgtggaagaaacaacacctgttgcacctgcagttgtcgaggaaa 467
>gnl|LJGI|TC67628 similar to UniRef100_A7PFI1 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 628
Score = 54.0 bits (27), Expect = 9e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 442 tttgcgaaatattatcgtgctctttgccctggtgaatgggttgacagatggaatgaacaa 501
||||| |||||||| || | ||||||||||||||||||||||| | |||||||| ||
Sbjct: 218 tttgctaaatattaccgctccctttgccctggtgaatgggttgaaaagtggaatgagcag 277
Query: 502 agggagaatgggacattcccagg 524
||||| || ||||| || |||||
Sbjct: 278 agggataacgggacttttccagg 300