Miyakogusa Predicted Gene
- Lj1g3v0246860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0246860.1 tr|G7KNH7|G7KNH7_MEDTR DNA mismatch repair
protein Msh6-2 OS=Medicago truncatula GN=MTR_6g086270
PE=,78.31,0,MutS_V,DNA mismatch repair protein MutS, C-terminal;
MutS_III,DNA mismatch repair protein MutS,
core,NODE_22791_length_3213_cov_8.453159.path2.1
(3021 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73374 similar to UniRef100_Q9SMV7 Cluster: DNA mismat... 1049 0.0
gnl|LJGI|FS331860 similar to UniRef100_Q9SMV7 Cluster: DNA misma... 971 0.0
>gnl|LJGI|TC73374 similar to UniRef100_Q9SMV7 Cluster: DNA mismatch repair protein
MSH6-2; n=1; Arabidopsis thaliana|Rep: DNA mismatch
repair protein MSH6-2 - Arabidopsis thaliana (Mouse-ear
cress), partial (13%)
Length = 709
Score = 1049 bits (529), Expect = 0.0
Identities = 538/541 (99%)
Strand = Plus / Plus
Query: 2481 tgttatccttgatgaattgggtcggggaacaagcacttttgatggctatgccattgcata 2540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttatccttgatgaattgggtcggggaacaagcacttttgatggctatgccattgcata 60
Query: 2541 tgctgttttccggcatttgattgagaaagttaactgtctcttgctttttgccacgcatta 2600
|||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 61 tgctgttttccggcatctgattgagaaagttaactgtcgcttgctatttgccacgcatta 120
Query: 2601 ccatccactgacgaaagagtttgcctctcatcctcgtgtgacaatgcaacacatggcttg 2660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatccactgacgaaagagtttgcctctcatcctcgtgtgacaatgcaacacatggcttg 180
Query: 2661 tgctttcaagtcgaaatccgacaccctttcaaaacgtgatcaggagctagtcttcctata 2720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgctttcaagtcgaaatccgacaccctttcaaaacgtgatcaggagctagtcttcctata 240
Query: 2721 tcggcttgcctccggagcatgccctgagagctacgggttgcaggtagcgctcatggctgg 2780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcggcttgcctccggagcatgccctgagagctacgggttgcaggtagcgctcatggctgg 300
Query: 2781 aatcccagagaagacggtaaacattgcttcaaaggctagccagcagatgaaaaaatcaat 2840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatcccagagaagacggtaaacattgcttcaaaggctagccagcagatgaaaaaatcaat 360
Query: 2841 tggaagaacattcaggtcaagtgaactgagatctgagttctcaactcttcatgaagaatg 2900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggaagaacattcaggtcaagtgaactgagatctgagttctcaactcttcatgaagaatg 420
Query: 2901 gttgaagaccttgatgtctatctcacgaatggaggatggtaaatcttttgatgaagatgt 2960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgaagaccttgatgtctatctcacgaatggaggatggtaaatcttttgatgaagatgt 480
Query: 2961 tctagatacattaatctgtttgtggtatgaactaaaaacttcatttagatcaggaaacta 3020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctagatacattaatctgtttgtggtatgaactaaaaacttcatttagatcaggaaacta 540
Query: 3021 g 3021
|
Sbjct: 541 g 541
>gnl|LJGI|FS331860 similar to UniRef100_Q9SMV7 Cluster: DNA mismatch repair protein
MSH6-2; n=1; Arabidopsis thaliana|Rep: DNA mismatch
repair protein MSH6-2 - Arabidopsis thaliana (Mouse-ear
cress), partial (10%)
Length = 783
Score = 971 bits (490), Expect = 0.0
Identities = 505/510 (99%)
Strand = Plus / Plus
Query: 1 atgcataaattcgtcaaggtcgatgacaccgtgaatgttagtcagaggagccattcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atgcataaattcgtcaaggtcgatgacaccgtgaatgttagtcagaggagccattcatca 323
Query: 61 aatgacagtttccccaaaccttctctatcaggaatatctattgatactaacagtaaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aatgacagtttccccaaaccttctctatcaggaatatctattgatactaacagtaaaggg 383
Query: 121 ctgcagaaggaggagtcagcttttgagcctttggtgaaagtgaaagacaatgctttcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgcagaaggaggagtcagcttttgagcctttggtgaaagtgaaagacaatgctttcagt 443
Query: 181 ttcaaggaaaagcgtaatctggaaaaagtagcccctgttgaaataattgaggatgatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcaaggaaaagcgtaatctggaaaaagtagcccctgttgaaataattgaggatgatatt 503
Query: 241 accggaccggaaaccccggggatgcagccccttgcttctcatgcaaagcgaactcgagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 accggaccggaaaccccggggatgcagccccttgcttctcatgcaaagcgaactcgagag 563
Query: 301 gagggttccaagttttgttccttgcgggattctggcaaacgagtcaggttccttgaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagggttccaagttttgttccttgcgggattctggcaaacgagtcaggttccttgaggat 623
Query: 361 ttaaatgcgttggacatgactaagaaggaagcagaagtggctagcaagtttgaatggctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttaaatgcgttggacatgactaagaaggaagcagaagtggctagcaagtttgaatggctt 683
Query: 421 tatccttctttaattctggacgccagcgggagaaggcctggtgatcctttgtatgacaag 480
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gatccttctcgaattagggacgccagcgggagaaggcctggtgatcctttgtatgacaag 743
Query: 481 actacgctttatgttcctccagaagttatg 510
||||||||||||||||||||||||||||||
Sbjct: 744 actacgctttatgttcctccagaagttatg 773