Miyakogusa Predicted Gene
- Lj1g3v0246790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0246790.1 tr|A9SK71|A9SK71_PHYPA Qc-SNARE, plant
SFT1-family OS=Physcomitrella patens subsp. patens GN=SFT1
PE,48.04,2e-19,T_SNARE,Target SNARE coiled-coil domain; SNARE,Target
SNARE coiled-coil domain; no
description,NULL;,NODE_53512_length_859_cov_76.688011.path2.1
(402 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67541 789 0.0
gnl|LJGI|BP064189 weakly similar to UniRef100_Q8VXX9 Cluster: Be... 450 e-126
gnl|LJGI|TC67188 weakly similar to UniRef100_Q8VXX9 Cluster: Bet... 309 7e-84
gnl|LJGI|TC61567 weakly similar to UniRef100_Q8VXX9 Cluster: Bet... 307 3e-83
gnl|LJGI|GO036190 similar to UniRef100_A7Q219 Cluster: Chromosom... 64 7e-10
>gnl|LJGI|TC67541
Length = 766
Score = 789 bits (398), Expect = 0.0
Identities = 401/402 (99%)
Strand = Plus / Plus
Query: 1 atggccgccaattcccaaagaccgggatctttctacggcggcgccgccccttaccgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atggccgccaattcccaaagaccgggatctttctacggcggcgccgccccttaccgatca 305
Query: 61 agcgatgggcttagtacccgacccggtgctgcctccgaggagatccaattgcgtattgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agcgatgggcttagtacccgacccggtgctgcctccgaggagatccaattgcgtattgat 365
Query: 121 cccatggacttggacgatgagctcaccggtcttcatagtcaagttagaaggctcaaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cccatggacttggacgatgagctcaccggtcttcatagtcaagttagaaggctcaaaaat 425
Query: 181 gttgctcaagagataggtactgaagtgaagtatcagaaagattttctggaacagctgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gttgctcaagagataggtactgaagtgaagtatcagaaagattttctggaacagctgcaa 485
Query: 241 atgacaatgataaaagctcaagctggagtgaagaataatttaagaagattgaacaagagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 atgacaatgataaaagctcaagctggagtgaagaataatttaagaagattgaacaagagc 545
Query: 301 atcatccaaagtggttcaaaccatattgttcatgtcattctttttgcgttagtttgtttc 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 accatccaaagtggttcaaaccatattgttcatgtcattctttttgcgttagtttgtttc 605
Query: 361 ttcatagtgtacctttggtcaaagatgtccagaaaatgaggc 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ttcatagtgtacctttggtcaaagatgtccagaaaatgaggc 647
>gnl|LJGI|BP064189 weakly similar to UniRef100_Q8VXX9 Cluster: Bet1-like protein
At4g14600; n=1; Arabidopsis thaliana|Rep: Bet1-like
protein At4g14600 - Arabidopsis thaliana (Mouse-ear
cress), partial (63%)
Length = 407
Score = 450 bits (227), Expect = e-126
Identities = 263/275 (95%)
Strand = Plus / Minus
Query: 128 acttggacgatgagctcaccggtcttcatagtcaagttagaaggctcaaaaatgttgctc 187
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 407 acttggacgatgagctcaccggtcttcatagtccagttagaaggctccaaaatgttgctc 348
Query: 188 aagagataggtactgaagtgaagtatcagaaagattttctggaacagctgcaaatgacaa 247
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
Sbjct: 347 cagagataggtactgaagtgaagtatccgaaagattttctggaacagctgccaatgacca 288
Query: 248 tgataaaagctcaagctggagtgaagaataatttaagaagattgaacaagagcatcatcc 307
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 287 tgataaaagctccagctggagtgaagaataatttaagaagattgaaccagagcatcatcc 228
Query: 308 aaagtggttcaaaccatattgttcatgtcattctttttgcgttagtttgtttcttcatag 367
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 caagtggttccaaccatattgttcatgtcattctttttgcgttagtttgtttcttcatag 168
Query: 368 tgtacctttggtcaaagatgtccagaaaatgaggc 402
||||||||||||| ||||||||| |||||||||||
Sbjct: 167 tgtacctttggtccaagatgtcccgaaaatgaggc 133
>gnl|LJGI|TC67188 weakly similar to UniRef100_Q8VXX9 Cluster: Bet1-like protein
At4g14600; n=1; Arabidopsis thaliana|Rep: Bet1-like
protein At4g14600 - Arabidopsis thaliana (Mouse-ear
cress), partial (88%)
Length = 639
Score = 309 bits (156), Expect = 7e-84
Identities = 323/378 (85%), Gaps = 3/378 (0%)
Strand = Plus / Plus
Query: 28 tctttctacggcggcgccgccccttaccgatcaagcgatgggcttagtacccgacccggt 87
|||| |||||||| ||| ||||||| ||||||||| || |||||||| || || | |||
Sbjct: 108 tcttcctacggcgacgctgcccctttccgatcaagagaagggcttagcacgagagcaggt 167
Query: 88 gctgcctccgaggagatccaattgcgtattgatcccat---ggacttggacgatgagctc 144
||||||||||| || || |||||||||||||||||| | |||| |||||||||| ||
Sbjct: 168 gctgcctccgatgaaattcaattgcgtattgatcccgtcggggacatggacgatgaaatc 227
Query: 145 accggtcttcatagtcaagttagaaggctcaaaaatgttgctcaagagataggtactgaa 204
|||||||||| | | |||||| ||| | | ||||||||| | ||||||||||| |||
Sbjct: 228 accggtcttcgtggccaagttcgaaaattgagaaatgttgccgaggagataggtacagaa 287
Query: 205 gtgaagtatcagaaagattttctggaacagctgcaaatgacaatgataaaagctcaagct 264
||||||| ||| | ||||||||||||| | ||||||||||||||||||| |||||||||
Sbjct: 288 gtgaagtctcacagagattttctggaagtgatgcaaatgacaatgataaaggctcaagct 347
Query: 265 ggagtgaagaataatttaagaagattgaacaagagcatcatccaaagtggttcaaaccat 324
|| ||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 348 ggggtgaagaataacttaagaagattgaacaagagcatcgtccaaaatggttcaaaccat 407
Query: 325 attgttcatgtcattctttttgcgttagtttgtttcttcatagtgtacctttggtcaaag 384
||||||||||| || ||||||| || | ||||||| |||||||||| |||||||||||
Sbjct: 408 attgttcatgtggttgtttttgcactaatctgtttctccatagtgtacttttggtcaaag 467
Query: 385 atgtccagaaaatgaggc 402
|| |||||||||||||||
Sbjct: 468 atttccagaaaatgaggc 485
>gnl|LJGI|TC61567 weakly similar to UniRef100_Q8VXX9 Cluster: Bet1-like protein
At4g14600; n=1; Arabidopsis thaliana|Rep: Bet1-like
protein At4g14600 - Arabidopsis thaliana (Mouse-ear
cress), partial (88%)
Length = 771
Score = 307 bits (155), Expect = 3e-83
Identities = 322/377 (85%), Gaps = 3/377 (0%)
Strand = Plus / Plus
Query: 28 tctttctacggcggcgccgccccttaccgatcaagcgatgggcttagtacccgacccggt 87
|||| |||||||| ||| ||||||| ||||||||| || |||||||| || || | |||
Sbjct: 174 tcttcctacggcgacgctgcccctttccgatcaagagaagggcttagcacgagagcaggt 233
Query: 88 gctgcctccgaggagatccaattgcgtattgatcccat---ggacttggacgatgagctc 144
||||||||||| || || |||||||||||||||||| | |||| |||||||||| ||
Sbjct: 234 gctgcctccgatgaaattcaattgcgtattgatcccgtcggggacatggacgatgaaatc 293
Query: 145 accggtcttcatagtcaagttagaaggctcaaaaatgttgctcaagagataggtactgaa 204
|||||||||| | | |||||| ||| | | ||||||||| | ||||||||||| |||
Sbjct: 294 accggtcttcgtggccaagttcgaaaattgagaaatgttgccgaggagataggtacagaa 353
Query: 205 gtgaagtatcagaaagattttctggaacagctgcaaatgacaatgataaaagctcaagct 264
||||||| ||| | ||||||||||||| | ||||||||||||||||||| |||||||||
Sbjct: 354 gtgaagtctcacagagattttctggaagtgatgcaaatgacaatgataaaggctcaagct 413
Query: 265 ggagtgaagaataatttaagaagattgaacaagagcatcatccaaagtggttcaaaccat 324
|| ||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 414 ggggtgaagaataacttaagaagattgaacaagagcatcgtccaaaatggttcaaaccat 473
Query: 325 attgttcatgtcattctttttgcgttagtttgtttcttcatagtgtacctttggtcaaag 384
||||||||||| || ||||||| || | ||||||| |||||||||| |||||||||||
Sbjct: 474 attgttcatgtggttgtttttgcactaatctgtttctccatagtgtacttttggtcaaag 533
Query: 385 atgtccagaaaatgagg 401
|| ||||||||||||||
Sbjct: 534 atttccagaaaatgagg 550
>gnl|LJGI|GO036190 similar to UniRef100_A7Q219 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 623
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 188 aagagataggtactgaagtgaagtatcagaaagattttctggaa 231
||||||||||||| |||||||||| ||| |||||||||||||||
Sbjct: 172 aagagataggtacagaagtgaagtctcacaaagattttctggaa 215