Miyakogusa Predicted Gene

Lj1g3v0244740.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0244740.1 Non Chatacterized Hit- tr|B4FLV2|B4FLV2_MAIZE
Uncharacterized protein OS=Zea mays PE=4 SV=1,46.21,6e-19,no
description,NULL; seg,NULL; Protein kinase-like (PK-like),Protein
kinase-like domain,gene.g29061.t1.1
         (444 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69264 similar to UniRef100_A7NUR2 Cluster: Chromosome...   103   9e-22

>gnl|LJGI|TC69264 similar to UniRef100_A7NUR2 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 771

 Score =  103 bits (52), Expect = 9e-22
 Identities = 153/186 (82%), Gaps = 3/186 (1%)
 Strand = Plus / Plus

                                                                       
Query: 262 tcatcatctggaagttgcaattcagaataccatgatgattgtgtgtggattgatgaactt 321
           ||||| |||| ||||| |||||||||  || | || || ||||| | | ||||||  |||
Sbjct: 198 tcatcttctgaaagttacaattcagatgacaaggaagaatgtgttttggttgatgcgctt 257

                                                                       
Query: 322 gcaactgcaatttcacatgtgaggatatctgaacctaagaggaacaagttgtggggaccc 381
           || || ||||||||||||||||||||||||||||| ||||| | || |||||| |  || 
Sbjct: 258 gccacagcaatttcacatgtgaggatatctgaaccaaagagaaccaggttgtgtgttcct 317

                                                                       
Query: 382 actggtccaattgatcagcaaggttcatctaacatgaaggctaac---ctctgtaaagca 438
           || || ||||| |  ||| ||||||||||||||||||||||||||   ||||||||||||
Sbjct: 318 accggcccaatagtgcaggaaggttcatctaacatgaaggctaacaatctctgtaaagca 377

                 
Query: 439 ttttga 444
           ||||||
Sbjct: 378 ttttga 383



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 63  ttcagcaaggataacagctgatgaagtacttaggcatccatggatattgtt 113
           ||||||||||||| ||||||||||||||||| | ||||||||||| |||||
Sbjct: 2   ttcagcaaggatatcagctgatgaagtacttcgacatccatggattttgtt 52