Miyakogusa Predicted Gene

Lj1g3v0244620.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0244620.1 Non Chatacterized Hit- tr|I1JGX7|I1JGX7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53193
PE,77.67,0,seg,NULL; no description,NULL; PREDICTED PROTEIN,NULL;
F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL,CUFF.25383.1
         (640 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80641 similar to UniRef100_Q9AUH6 Cluster: F-box cont...   771   0.0  

>gnl|LJGI|TC80641 similar to UniRef100_Q9AUH6 Cluster: F-box containing protein TIR1;
           n=1; Populus tremula x Populus tremuloides|Rep: F-box
           containing protein TIR1 - Populus tremula x Populus
           tremuloides, partial (11%)
          Length = 619

 Score =  771 bits (389), Expect = 0.0
 Identities = 392/393 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagagataaccaccctccgccgcccacctccgacgacgaccaccgatcctcctccctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atgagagataaccaccctccgccgcccacctccgacgacgaccaccgatcctcctccctc 286

                                                                       
Query: 61  ccggatcttgccagaggcggccaaatcaccgactcatcctcctccaaaacccgacccgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ccggatcttgccagaggcggccaaatcaccgactcatcctcctccaaaacccgacccgga 346

                                                                       
Query: 121 cccggctcatcatcatcatcactccctcaaccgggttccagctcggagctccaggcacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cccggctcatcatcatcatcactccctcaaccgggttccagctcggagctccaggcacag 406

                                                                       
Query: 181 ttcccggaccaggtcctcgagaacgtcttggaaaacgtgctccacttcctctcctcacgc 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttcccggaccagggcctcgagaacgtcttggaaaacgtgctccacttcctctcctcacgc 466

                                                                       
Query: 241 cgcgaccgcaacgccgcctcattggtgtgccgctcctggtgccgcgccgaggcgctcacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cgcgaccgcaacgccgcctcattggtgtgccgctcctggtgccgcgccgaggcgctcacc 526

                                                                       
Query: 301 cgatccgagcttttcatcgggaactgctacgcggtgtcgcctcgccgcgccaccgccagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 cgatccgagcttttcatcgggaactgctacgcggtgtcgcctcgccgcgccaccgccagg 586

                                            
Query: 361 ttcagccgcgtccggtctgttaccgtgaagggg 393
           |||||||||||||||||||||||||||||||||
Sbjct: 587 ttcagccgcgtccggtctgttaccgtgaagggg 619