Miyakogusa Predicted Gene
- Lj1g3v0244530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0244530.1 Non Chatacterized Hit- tr|I1P9U5|I1P9U5_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,70.97,0.0007,HSP20,Alpha crystallin/Hsp20 domain; no
description,NULL; HEAT-SHOCK PROTEIN 17,NULL; SMALL
HEAT-SHO,CUFF.25370.1
(463 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW594343 similar to UniRef100_Q6WHC0 Cluster: Chloropla... 846 0.0
gnl|LJGI|TC71900 similar to UniRef100_A1E463 Cluster: 17.7 KD cl... 404 e-112
gnl|LJGI|TC63935 similar to UniRef100_P05478 Cluster: 18.5 kDa c... 121 4e-27
>gnl|LJGI|BW594343 similar to UniRef100_Q6WHC0 Cluster: Chloroplast small heat shock
protein class I; n=1; Capsicum frutescens|Rep:
Chloroplast small heat shock protein class I - Capsicum
frutescens (Cayenne pepper) (Tabasco pepper), partial
(89%)
Length = 481
Score = 846 bits (427), Expect = 0.0
Identities = 427/427 (100%)
Strand = Plus / Plus
Query: 1 atgtctctcattccaagcttcttcggtggtcgacgaagcaacgtcttcgatccattctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atgtctctcattccaagcttcttcggtggtcgacgaagcaacgtcttcgatccattctct 114
Query: 61 caagaattgtgggacccctttgaaggattccctgtctccaattcctctgcttgcgagacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 caagaattgtgggacccctttgaaggattccctgtctccaattcctctgcttgcgagacc 174
Query: 121 acggccatagccaacacgcgtgtggactggaaggagacgccggaggctcacgtgttcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 acggccatagccaacacgcgtgtggactggaaggagacgccggaggctcacgtgttcagc 234
Query: 181 gtcgacctccctgggctcaagaaggaggaggtgaaggtggaggttgaggacggcagcgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gtcgacctccctgggctcaagaaggaggaggtgaaggtggaggttgaggacggcagcgtg 294
Query: 241 ttgcagataagcggggagagaagcagggagcaggaacagaaggatgataagtggcaccgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttgcagataagcggggagagaagcagggagcaggaacagaaggatgataagtggcaccgc 354
Query: 301 gtagagaggagctccgggaagttcatgaggaggttccggctgccggagaatgctaaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gtagagaggagctccgggaagttcatgaggaggttccggctgccggagaatgctaaaatg 414
Query: 361 gatcaggttaaggctgccatggagaatggggtgctcactgttactgtgcctaaggaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gatcaggttaaggctgccatggagaatggggtgctcactgttactgtgcctaaggaggaa 474
Query: 421 gagaaga 427
|||||||
Sbjct: 475 gagaaga 481
>gnl|LJGI|TC71900 similar to UniRef100_A1E463 Cluster: 17.7 KD class I small
heat-shock protein; n=1; Ageratina adenophora|Rep: 17.7
KD class I small heat-shock protein - Ageratina
adenophora, partial (86%)
Length = 502
Score = 404 bits (204), Expect = e-112
Identities = 353/405 (87%), Gaps = 12/405 (2%)
Strand = Plus / Plus
Query: 1 atgtctctcattccaagcttcttcggtggtcgacgaagcaacgtcttcgatccattctct 60
|||||||| ||||||||||||||||| |||||||| |||||||||||||| || |||||
Sbjct: 98 atgtctctgattccaagcttcttcggcggtcgacggagcaacgtcttcgaccctttctcc 157
Query: 61 caagaattgtgggacccctttgaaggattccctgtctccaattcc------------tct 108
| ||| |||||||| || |||||||| || ||||||||||| |||
Sbjct: 158 ctagacacatgggacccgttcgaaggattgcccctctccaattccaacctcccttcctct 217
Query: 109 gcttgcgagaccacggccatagccaacacgcgtgtggactggaaggagacgccggaggct 168
||| |||| ||||| |||||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 218 gctcgcgaaaccaccgccatagccaacacccgcgtggactggaaggagaccccggaggcg 277
Query: 169 cacgtgttcagcgtcgacctccctgggctcaagaaggaggaggtgaaggtggaggttgag 228
|||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||
Sbjct: 278 cacgtgttcagcgtcgaccttccggggctgaagaaggaggaagtgaaggtggaggttgag 337
Query: 229 gacggcagcgtgttgcagataagcggggagagaagcagggagcaggaacagaaggatgat 288
||||| | ||| |||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 338 gacgggaaggtgctgcagataagcggggagagaagcaaggagcaggagcagaaggatgat 397
Query: 289 aagtggcaccgcgtagagaggagctccgggaagttcatgaggaggttccggctgccggag 348
|||||||||||| | ||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 398 aagtggcaccgcattgagcggagctccgggaagttcatgaggaggttccggctcccggag 457
Query: 349 aatgctaaaatggatcaggttaaggctgccatggagaatggggtg 393
|||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 458 aatgctaagatggagcaggttaaggctgctatggagaatggggtg 502
>gnl|LJGI|TC63935 similar to UniRef100_P05478 Cluster: 18.5 kDa class I heat shock
protein; n=1; Glycine max|Rep: 18.5 kDa class I heat
shock protein - Glycine max (Soybean), partial (98%)
Length = 756
Score = 121 bits (61), Expect = 4e-27
Identities = 118/137 (86%)
Strand = Plus / Plus
Query: 327 gaggaggttccggctgccggagaatgctaaaatggatcaggttaaggctgccatggagaa 386
|||||||||| | |||| |||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 453 gaggaggttcagattgcctgagaatgctaaaatggatcaagttaaggcttccatggagaa 512
Query: 387 tggggtgctcactgttactgtgcctaaggaggaagagaagaagcctgaggttaagtctat 446
|||||| |||||||||||||| || ||||| || ||||||||||| |||||||| ||
Sbjct: 513 tggggttctcactgttactgtccccaaggaagagatcaagaagcctgaagttaagtccat 572
Query: 447 tcagatttctggttgaa 463
| | || ||||||||||
Sbjct: 573 tgaaatctctggttgaa 589