Miyakogusa Predicted Gene
- Lj1g3v0213240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0213240.1 CUFF.25350.1
(295 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65924 206 5e-53
gnl|LJGI|DC595226 similar to UniRef100_Q0WN21 Cluster: Protein k... 163 7e-40
gnl|LJGI|TC61083 weakly similar to UniRef100_Q9SK08 Cluster: LOB... 68 3e-11
gnl|LJGI|TC76054 similar to UniRef100_A7QBE9 Cluster: Chromosome... 58 3e-08
>gnl|LJGI|TC65924
Length = 1138
Score = 206 bits (104), Expect = 5e-53
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 atgggccgccatccaccagatcaagtcggagtcccccaatcgctgcatcatcccctccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 atgggccgccatccaccagatcaagtcggagtcccccaatcgctgcatcatcccctccga 228
Query: 61 tttacgattctcctgccgcctcggctgcctgtgatgttcgcgac 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tttacgattctcctgccgcctcggctgcctgtgatgttcgcgac 272
Score = 170 bits (86), Expect = 3e-42
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 104 caagaccgagagggtaccccttgtccagagcaggcaacgaaagcagattaagggagtttg 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caagaccgagagggtaccccttgtccagagcaggcaacgaaagcagattaagggagtttg 383
Query: 164 ttggcgatggtggttgttggggtggt 189
||||||||||||||||||||||||||
Sbjct: 384 ttggcgatggtggttgttggggtggt 409
>gnl|LJGI|DC595226 similar to UniRef100_Q0WN21 Cluster: Protein kinase like protein;
n=1; Arabidopsis thaliana|Rep: Protein kinase like
protein - Arabidopsis thaliana (Mouse-ear cress),
partial (4%)
Length = 283
Score = 163 bits (82), Expect = 7e-40
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 23 aagtcggagtcccccaatcgctgcatcatcccctccgatttacgattctcctgccgcctc 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 aagtcggagtcccccaatcgctgcatcatcccctccgatttacgattctcctgccgcctc 205
Query: 83 ggctgcctgtgatgttcgcgac 104
||||||||||||||||||||||
Sbjct: 206 ggctgcctgtgatgttcgcgac 227
>gnl|LJGI|TC61083 weakly similar to UniRef100_Q9SK08 Cluster: LOB domain-containing
protein 11; n=2; Arabidopsis thaliana|Rep: LOB
domain-containing protein 11 - Arabidopsis thaliana
(Mouse-ear cress), partial (12%)
Length = 768
Score = 67.9 bits (34), Expect = 3e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 9 ccatccaccagatcaagtcggagtcccccaatcgctgcatcatcccctccgatttacgat 68
|||||||| ||||| ||||||||||||||| || ||||| ||| ||||| || |||||
Sbjct: 196 ccatccacaagatctggtcggagtcccccaactgccgcatcgtcctctccggttaacgat 137
Query: 69 tctcctgccgcctcggct 86
||||| ||||||||||||
Sbjct: 136 tctcccgccgcctcggct 119
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 153 aagggagtttgttggcgatggtggttgttggggtggt 189
|||||| |||||||| | |||||||||||||||||||
Sbjct: 92 aagggactttgttggtggtggtggttgttggggtggt 56
>gnl|LJGI|TC76054 similar to UniRef100_A7QBE9 Cluster: Chromosome chr13 scaffold_74,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_74, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 1256
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 123 cttgtccagagcaggcaacgaaagcagattaagggagtttgttgg 167
||||||||||||||||||| ||||||||| | | |||||||||||
Sbjct: 399 cttgtccagagcaggcaacaaaagcagatgacgtgagtttgttgg 355