Miyakogusa Predicted Gene

Lj1g3v0183010.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0183010.1 Non Chatacterized Hit- tr|G3NZ37|G3NZ37_GASAC
Uncharacterized protein (Fragment) OS=Gasterosteus
acu,35.58,2e-18,seg,NULL; AhpC-TSA_2,NULL,CUFF.25341.1
         (1197 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO034300 similar to UniRef100_A7PNA7 Cluster: Chromosom...  1209   0.0  

>gnl|LJGI|GO034300 similar to UniRef100_A7PNA7 Cluster: Chromosome chr1 scaffold_22,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_22, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 632

 Score = 1209 bits (610), Expect = 0.0
 Identities = 610/610 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacttcattttcagtagaagaattcataggaaatggagttttgaaggcgttgctccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23  atgacttcattttcagtagaagaattcataggaaatggagttttgaaggcgttgctccca 82

                                                                       
Query: 61  aagttgttggaggaaggttgggatgatgtgccaaccctgaaggttatggactcagaggat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  aagttgttggaggaaggttgggatgatgtgccaaccctgaaggttatggactcagaggat 142

                                                                       
Query: 121 atgaattcaataaacatgacacaacagcagaaggatgcacttggaattaggtcataccta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atgaattcaataaacatgacacaacagcagaaggatgcacttggaattaggtcataccta 202

                                                                       
Query: 181 catgatcatggattgatgcaatatgcagataagctagaggcctctggtagaactctgcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 catgatcatggattgatgcaatatgcagataagctagaggcctctggtagaactctgcca 262

                                                                       
Query: 241 gagcttctacgtttaaacagcatggatctttcttctcaattcgccatgaaaagaggccat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gagcttctacgtttaaacagcatggatctttcttctcaattcgccatgaaaagaggccat 322

                                                                       
Query: 301 gtagtccgtttcatagacagaacaaaatgtgatgacaatgattcctttaaactacgcgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtagtccgtttcatagacagaacaaaatgtgatgacaatgattcctttaaactacgcgca 382

                                                                       
Query: 361 atcatggctaggaaaaggtccagcatagtgatcagacacaataatagcatcccaaagagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atcatggctaggaaaaggtccagcatagtgatcagacacaataatagcatcccaaagagt 442

                                                                       
Query: 421 gttgcaacttctgataaatcgcttgaacaatcacttgctgatctaaagattaaagatgga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gttgcaacttctgataaatcgcttgaacaatcacttgctgatctaaagattaaagatgga 502

                                                                       
Query: 481 catgtttttaaagggattgtggcagctgagccggcagaagctagagcatgtgggtgtgtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 catgtttttaaagggattgtggcagctgagccggcagaagctagagcatgtgggtgtgtg 562

                                                                       
Query: 541 caacctcctccagtgagtgaccaaattgctccctatgctgctattgaaaatatatcagtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 caacctcctccagtgagtgaccaaattgctccctatgctgctattgaaaatatatcagtt 622

                     
Query: 601 cagaaactga 610
           ||||||||||
Sbjct: 623 cagaaactga 632