Miyakogusa Predicted Gene

Lj1g3v0178890.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0178890.1 Non Chatacterized Hit- tr|A3CEP3|A3CEP3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,69.23,0.0000000000004,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Starch-binding
domain-like,Carbohydrate-binding-lik,CUFF.25336.1
         (636 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AI967521 similar to UniRef100_A7NUJ3 Cluster: Chromosom...    56   3e-07

>gnl|LJGI|AI967521 similar to UniRef100_A7NUJ3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 420

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 153 tgaggcatggaagaaagtttttgggccagcttttgtctat 192
           |||||||||||||||||||||||| |||| |||| |||||
Sbjct: 128 tgaggcatggaagaaagtttttggtccagtttttatctat 167