Miyakogusa Predicted Gene

Lj1g3v0177840.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0177840.1 tr|Q08BZ9|Q08BZ9_DANRE Zgc:153893 OS=Danio rerio
GN=zgc:153893 PE=2 SV=1,40.15,3e-19,TRAF-TYPE ZINC FINGER
PROTEIN-RELATED,NULL; zf-TRAF,NULL; TRAF domain-like,TRAF-like;
seg,NULL,CUFF.25331.1
         (615 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62222 similar to UniRef100_A7NUJ0 Cluster: Chromosome...  1219   0.0  
gnl|LJGI|DC593568 similar to UniRef100_A7NUJ2 Cluster: Chromosom...   363   e-100

>gnl|LJGI|TC62222 similar to UniRef100_A7NUJ0 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 1218

 Score = 1219 bits (615), Expect = 0.0
 Identities = 615/615 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagctggttcggatcaagcaactagtgtgtgcactcactgtgatcgggctatccct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atggaagctggttcggatcaagcaactagtgtgtgcactcactgtgatcgggctatccct 329

                                                                       
Query: 61  gctgcaaatattgacttgcatagtgtccattgcgcccggaaccttgaaaaatgcaaagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gctgcaaatattgacttgcatagtgtccattgcgcccggaaccttgaaaaatgcaaagtt 389

                                                                       
Query: 121 tgtggtgatatggttcccagaaaacatgcagaggatcactacttaagtactcatgcgccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgtggtgatatggttcccagaaaacatgcagaggatcactacttaagtactcatgcgccg 449

                                                                       
Query: 181 gtatcctgttcattgtgcagtgagacaatgcagcgtgatattttagatatccataaaggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtatcctgttcattgtgcagtgagacaatgcagcgtgatattttagatatccataaaggt 509

                                                                       
Query: 241 gaaaactgccctcaaaggattgtcacttgtgagttttgtgagtttccattgccagcagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gaaaactgccctcaaaggattgtcacttgtgagttttgtgagtttccattgccagcagtt 569

                                                                       
Query: 301 gatctggccgagcatcaggaagtatgtgggaatcgaacagaactttgttacctttgtaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gatctggccgagcatcaggaagtatgtgggaatcgaacagaactttgttacctttgtaac 629

                                                                       
Query: 361 aaatatgttaggcttcgtgaaagatttagtcatgaagctagatgcaatggtgtccaagat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aaatatgttaggcttcgtgaaagatttagtcatgaagctagatgcaatggtgtccaagat 689

                                                                       
Query: 421 aatactgtgggctcttcgaggaatgtgagagaagccgagagagacgaaggtcctcctcga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aatactgtgggctcttcgaggaatgtgagagaagccgagagagacgaaggtcctcctcga 749

                                                                       
Query: 481 agaaggcctaggccacagcagaatgacttctcaactaggcgtcttctgatcacaatagcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 agaaggcctaggccacagcagaatgacttctcaactaggcgtcttctgatcacaatagcc 809

                                                                       
Query: 541 atcactggtattgctgttatactgggatctatttttctgcagaagaaggcagagcctagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 atcactggtattgctgttatactgggatctatttttctgcagaagaaggcagagcctagt 869

                          
Query: 601 gatgtgcattaacat 615
           |||||||||||||||
Sbjct: 870 gatgtgcattaacat 884


>gnl|LJGI|DC593568 similar to UniRef100_A7NUJ2 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 582

 Score =  363 bits (183), Expect = e-100
 Identities = 183/183 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagctggttcggatcaagcaactagtgtgtgcactcactgtgatcgggctatccct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atggaagctggttcggatcaagcaactagtgtgtgcactcactgtgatcgggctatccct 309

                                                                       
Query: 61  gctgcaaatattgacttgcatagtgtccattgcgcccggaaccttgaaaaatgcaaagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gctgcaaatattgacttgcatagtgtccattgcgcccggaaccttgaaaaatgcaaagtt 369

                                                                       
Query: 121 tgtggtgatatggttcccagaaaacatgcagaggatcactacttaagtactcatgcgccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgtggtgatatggttcccagaaaacatgcagaggatcactacttaagtactcatgcgccg 429

              
Query: 181 gta 183
           |||
Sbjct: 430 gta 432