Miyakogusa Predicted Gene

Lj1g3v0130160.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0130160.1 Non Chatacterized Hit- tr|I1JAN2|I1JAN2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48567
PE,78.74,0,coiled-coil,NULL; DUF827,Protein of unknown function
DUF827, plant; seg,NULL,NODE_8258_length_2709_cov_112.659286.path2.1
         (2379 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74368 weakly similar to UniRef100_A7PB81 Cluster: Chr...   109   8e-23
gnl|LJGI|TC69304 weakly similar to UniRef100_A7PB81 Cluster: Chr...   109   8e-23
gnl|LJGI|TC69736 similar to UniRef100_A7PB81 Cluster: Chromosome...    92   2e-17
gnl|LJGI|BP061896                                                      86   1e-15
gnl|LJGI|TC73978 weakly similar to UniRef100_A7PB81 Cluster: Chr...    84   5e-15
gnl|LJGI|BP069331 similar to UniRef100_A7PB81 Cluster: Chromosom...    76   1e-12
gnl|LJGI|TC77456 weakly similar to UniRef100_A7PB81 Cluster: Chr...    62   2e-08
gnl|LJGI|TC79323 similar to UniRef100_A7PB81 Cluster: Chromosome...    58   3e-07

>gnl|LJGI|TC74368 weakly similar to UniRef100_A7PB81 Cluster: Chromosome chr16
           scaffold_10, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 544

 Score =  109 bits (55), Expect = 8e-23
 Identities = 174/211 (82%), Gaps = 2/211 (0%)
 Strand = Plus / Plus

                                                                       
Query: 473 caattgatgagctaaaagaagcacagagagtggctgaggaagcaaatgagaaactcaggg 532
           |||||||  |||||||||||||||| |||||  || ||||||||||||||||||| | ||
Sbjct: 204 caattgagaagctaaaagaagcacaaagagtaactaaggaagcaaatgagaaacttatgg 263

                                                                       
Query: 533 aggcaatggtggctcaaaagcgggctgaggaggactctgagatcgagaagttccgagctg 592
           ||||| ||||||||||||| |||| |||||| || ||| | || |||||| ||||   | 
Sbjct: 264 aggcattggtggctcaaaaacgggttgaggaagattcttaaattgagaagctccgcagtt 323

                                                                       
Query: 593 ttgaattggaacaggctggacttgaagctgttcagaagaaggatgaagaatggcagaaag 652
           ||||||  | ||| |||||| |||||||| |||| |||| ||| | || |||| | ||||
Sbjct: 324 ttgaatccggacatgctggaattgaagctattcaaaagatggaag-aggatggtaaaaag 382

                                          
Query: 653 agc-ttgaaagtgtgaggaaccagcatgctt 682
           ||| ||||| |||| ||||||||||||||||
Sbjct: 383 agctttgaaggtgtaaggaaccagcatgctt 413



 Score = 54.0 bits (27), Expect = 4e-06
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 381 ttcagaattgcaaacccagttaaatcttgctcaagaagatcta 423
           ||||||||||| ||||||| |||||||||||| | ||||||||
Sbjct: 146 ttcagaattgctaacccagataaatcttgctctaaaagatcta 188


>gnl|LJGI|TC69304 weakly similar to UniRef100_A7PB81 Cluster: Chromosome chr16
           scaffold_10, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 563

 Score =  109 bits (55), Expect = 8e-23
 Identities = 174/211 (82%), Gaps = 2/211 (0%)
 Strand = Plus / Plus

                                                                       
Query: 473 caattgatgagctaaaagaagcacagagagtggctgaggaagcaaatgagaaactcaggg 532
           |||||||  |||||||||||||||| |||||  || ||||||||||||||||||| | ||
Sbjct: 225 caattgagaagctaaaagaagcacaaagagtaactaaggaagcaaatgagaaacttatgg 284

                                                                       
Query: 533 aggcaatggtggctcaaaagcgggctgaggaggactctgagatcgagaagttccgagctg 592
           ||||| ||||||||||||| |||| |||||| || ||| | || |||||| ||||   | 
Sbjct: 285 aggcattggtggctcaaaaacgggttgaggaagattcttaaattgagaagctccgcagtt 344

                                                                       
Query: 593 ttgaattggaacaggctggacttgaagctgttcagaagaaggatgaagaatggcagaaag 652
           ||||||  | ||| |||||| |||||||| |||| |||| ||| | || |||| | ||||
Sbjct: 345 ttgaatccggacatgctggaattgaagctattcaaaagatggaag-aggatggtaaaaag 403

                                          
Query: 653 agc-ttgaaagtgtgaggaaccagcatgctt 682
           ||| ||||| |||| ||||||||||||||||
Sbjct: 404 agctttgaaggtgtaaggaaccagcatgctt 434



 Score = 54.0 bits (27), Expect = 4e-06
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 381 ttcagaattgcaaacccagttaaatcttgctcaagaagatcta 423
           ||||||||||| ||||||| |||||||||||| | ||||||||
Sbjct: 167 ttcagaattgctaacccagataaatcttgctctaaaagatcta 209


>gnl|LJGI|TC69736 similar to UniRef100_A7PB81 Cluster: Chromosome chr16 scaffold_10,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr16 scaffold_10, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 627

 Score = 91.7 bits (46), Expect = 2e-17
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                          
Query: 2334 tgagaatgtgaatggaaaactgaaggaagatgagagcagagaaaaa 2379
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tgagaatgtgaatggaaaactgaaggaagatgagagcagagaaaaa 46


>gnl|LJGI|BP061896 
          Length = 485

 Score = 85.7 bits (43), Expect = 1e-15
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 agctaaaagaagcacagagagtggctgaggaagcaaatgagaaactcagggaggcaatgg 541
           |||||||||||||||  |||||  || ||||||| ||||||||||| | ||||||| |||
Sbjct: 336 agctaaaagaagcaccaagagtaactaaggaagcnaatgagaaacttatggaggcattgg 277

                                                         
Query: 542 tggctcaaaagcgggctgaggaggactctgagatcgagaagttccg 587
           |||||||||| |||| ||||||||| ||| | || |||||| ||||
Sbjct: 276 tggctcaaaaacgggttgaggaggattcttaaattgagaagctccg 231



 Score = 61.9 bits (31), Expect = 2e-08
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 381 ttcagaattgcaaacccagttaaatcttgctcaagaagatcta 423
           ||||||||||||||||||| |||||||||||| | ||||||||
Sbjct: 403 ttcagaattgcaaacccagataaatcttgctctaaaagatcta 361


>gnl|LJGI|TC73978 weakly similar to UniRef100_A7PB81 Cluster: Chromosome chr16
           scaffold_10, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 571

 Score = 83.8 bits (42), Expect = 5e-15
 Identities = 105/126 (83%)
 Strand = Plus / Minus

                                                                       
Query: 283 tcgccacgatctttaaattcaaagcccattgctgagcggaaatcaccaaggcccacctcc 342
           ||||| |||||| | || |||||||||| || |||||||||||||||||| ||  | |||
Sbjct: 130 tcgccgcgatctgtgaactcaaagcccactgttgagcggaaatcaccaagacctccatcc 71

                                                                       
Query: 343 accacacctgataagcaacccctaaaagctgcgaagggttcagaattgcaaacccagtta 402
           ||| |||||||||| ||| ||| |||||| |  ||||||| ||||||||| | |||||| 
Sbjct: 70  accccacctgataaacaagccccaaaagcagaaaagggtttagaattgcagaaccagttg 11

                 
Query: 403 aatctt 408
           ||||||
Sbjct: 10  aatctt 5


>gnl|LJGI|BP069331 similar to UniRef100_A7PB81 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (3%)
          Length = 405

 Score = 75.8 bits (38), Expect = 1e-12
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 509 aggaagcaaatgagaaactcagggaggcaatggtggctcaaaagcgggctgaggagga 566
           ||||||||||||||||||| | ||||||| ||||||||||||| |||| |||||||||
Sbjct: 312 aggaagcaaatgagaaacttatggaggcattggtggctcaaaaacgggttgaggagga 255


>gnl|LJGI|TC77456 weakly similar to UniRef100_A7PB81 Cluster: Chromosome chr16
           scaffold_10, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 425

 Score = 61.9 bits (31), Expect = 2e-08
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 509 aggaagcaaatgagaaactcagggaggcaatggtggctcaaaa 551
           ||||||||||||||||||| | ||||||| |||||||||||||
Sbjct: 113 aggaagcaaatgagaaacttatggaggcattggtggctcaaaa 155


>gnl|LJGI|TC79323 similar to UniRef100_A7PB81 Cluster: Chromosome chr16 scaffold_10,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr16 scaffold_10, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (5%)
          Length = 642

 Score = 58.0 bits (29), Expect = 3e-07
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 2339 atgtgaatggaaaactgaaggaagatgagagcagagaaaaa 2379
            |||||||||| ||| |||||||||||||||||| |||||||
Sbjct: 602  atgtgaatgggaaagtgaaggaagatgagagcaaagaaaaa 562