Miyakogusa Predicted Gene

Lj1g3v0130100.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0130100.1 Non Chatacterized Hit- tr|K0SJM3|K0SJM3_THAOC
Uncharacterized protein (Fragment) OS=Thalassiosira
oc,29.9,0.0000001,seg,NULL,CUFF.25267.1
         (1167 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69965 similar to UniRef100_A7PB99 Cluster: Chromosome...   983   0.0  
gnl|LJGI|AV407455 similar to UniRef100_A7PB99 Cluster: Chromosom...   757   0.0  

>gnl|LJGI|TC69965 similar to UniRef100_A7PB99 Cluster: Chromosome chr16 scaffold_10,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr16 scaffold_10, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (51%)
          Length = 541

 Score =  983 bits (496), Expect = 0.0
 Identities = 502/504 (99%)
 Strand = Plus / Plus

                                                                        
Query: 664  cttcatggcgctatgagaggtctagcttacatgcatgaccatgaaagattgcaccagagt 723
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    cttcatggcgctatgagaggtctagcttacatgcatgaccatgaaagattgcaccagagt 60

                                                                        
Query: 724  ctaggaccattttctgtggctctcaacacaatttcagaaagagaagctcgctatttgatt 783
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctaggaccattttctgtggctctcaacacaatttcagaaagagaagctcgctatttgatt 120

                                                                        
Query: 784  ccaagacttcgggatctagccttttctgttgatatcaggtactcggaactagagaattca 843
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ccaagacttcgggatctagccttttctgttgatatcaggtactcggaactagagaattca 180

                                                                        
Query: 844  ggatcacttgcagatgggctttgggcacgagcttcacgtgctggtgcattcacatattta 903
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ggatcacttgcagatgggctttgggcacgagcttcacgtgctggtgcattcacatattta 240

                                                                        
Query: 904  gagaaaagagcttttggaatagctgatgacatatacgaagcaggccttctttttgcatac 963
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gagaaaagagcttttggaatagctgatgacatatacgaagcaggccttctttttgcatac 300

                                                                        
Query: 964  ctagcttttgttccattttgtgaagctggtgtaacggatggcctttccttgcaaaggctt 1023
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ctagcttttgttccattttgtgaagctggtgtaacggatggcctttccttgcaaaggctt 360

                                                                        
Query: 1024 ttggagaacactttccaacttgatcttgaagcaacgcgggagtattgtatagcagatgat 1083
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  ttggagaacactttccgacttgatcttgaagcaacgcgggagtattgtatagcagatgat 420

                                                                        
Query: 1084 agattagtagatggtgtcgagttcctggatctaggcaatggcgctggctgggagataatt 1143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 421  agattagtagatggtgtcgagttcctggatctaggcaatggcgctggctgggagatactt 480

                                    
Query: 1144 caggcaatgcttaatgctgacttt 1167
            ||||||||||||||||||||||||
Sbjct: 481  caggcaatgcttaatgctgacttt 504


>gnl|LJGI|AV407455 similar to UniRef100_A7PB99 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 399

 Score =  757 bits (382), Expect = 0.0
 Identities = 382/382 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttgtggcggttgttcctcttcgtcctcactgctcctccttccaccatttcaccctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18  atggttgtggcggttgttcctcttcgtcctcactgctcctccttccaccatttcaccctt 77

                                                                       
Query: 61  tcaagctccactccgtcctctcaccactcccccaaattccgtctactccgaccgaacgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  tcaagctccactccgtcctctcaccactcccccaaattccgtctactccgaccgaacgcc 137

                                                                       
Query: 121 accttaatctccgactccaattccttccaggtgggaaaacccattggcagctatggcttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 accttaatctccgactccaattccttccaggtgggaaaacccattggcagctatggcttc 197

                                                                       
Query: 181 atgaacgtcaccactgtgtttccctcctcgggaccaggctctgagtattcgtatagcgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atgaacgtcaccactgtgtttccctcctcgggaccaggctctgagtattcgtatagcgat 257

                                                                       
Query: 241 ttcaaaggactcaaaacccaagatgttgaagaaggcagcgtcaaaatcaggctttatgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttcaaaggactcaaaacccaagatgttgaagaaggcagcgtcaaaatcaggctttatgaa 317

                                                                       
Query: 301 gggagagtttcccagggtccacttagaggaactcctgttgtttttaaggtttatccggga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gggagagtttcccagggtccacttagaggaactcctgttgtttttaaggtttatccggga 377

                                 
Query: 361 agacgagctgccggggctgttg 382
           ||||||||||||||||||||||
Sbjct: 378 agacgagctgccggggctgttg 399