Miyakogusa Predicted Gene
- Lj1g3v0129860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0129860.1 tr|Q8S5C2|Q8S5C2_SOYBN 4-coumarate:CoA ligase
isoenzyme 3 OS=Glycine max GN=Gm4CL-3 PE=2 SV=1,84.06,0,Acetyl-CoA
synthetase-like,NULL; seg,NULL; no description,NULL;
AMP-binding,AMP-dependent
synthetase,NODE_26210_length_2390_cov_154.529709.path1.1
(1746 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76024 similar to UniRef100_P31687 Cluster: 4-coumarat... 1283 0.0
gnl|LJGI|TC70657 homologue to UniRef100_P31687 Cluster: 4-coumar... 1072 0.0
gnl|LJGI|TC76208 homologue to UniRef100_Q8S5C2 Cluster: 4-coumar... 1045 0.0
gnl|LJGI|TC76664 similar to UniRef100_Q8S5C2 Cluster: 4-coumarat... 854 0.0
gnl|LJGI|FS350112 similar to UniRef100_P31687 Cluster: 4-coumara... 307 1e-82
gnl|LJGI|TC72583 homologue to UniRef100_P31687 Cluster: 4-coumar... 250 3e-65
gnl|LJGI|TC62381 homologue to UniRef100_Q8W558 Cluster: 4-coumar... 74 3e-12
gnl|LJGI|TC59755 homologue to UniRef100_Q8W558 Cluster: 4-coumar... 68 2e-10
gnl|LJGI|TC71364 similar to UniRef100_Q8W558 Cluster: 4-coumarat... 66 8e-10
>gnl|LJGI|TC76024 similar to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2; n=1;
Glycine max|Rep: 4-coumarate--CoA ligase 2 - Glycine max
(Soybean), partial (36%)
Length = 729
Score = 1283 bits (647), Expect = 0.0
Identities = 647/647 (100%)
Strand = Plus / Plus
Query: 462 gaaactcgtcatcactcaggcaatgtacgtcgacaagctccggccactggaagacgttaa 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaactcgtcatcactcaggcaatgtacgtcgacaagctccggccactggaagacgttaa 60
Query: 522 cggtaacgactacccgaagctcggggaggatttcaaggtggtcaccgtggacgaaccacc 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggtaacgactacccgaagctcggggaggatttcaaggtggtcaccgtggacgaaccacc 120
Query: 582 caaggattgcttggacttctccgtgatttcggaaggaaaagaggatgatctgccggaggt 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaggattgcttggacttctccgtgatttcggaaggaaaagaggatgatctgccggaggt 180
Query: 642 ggagatcaacccagaggacgcggtggcgctgccattctcctccggcacgacgggcctccc 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggagatcaacccagaggacgcggtggcgctgccattctcctccggcacgacgggcctccc 240
Query: 702 gaagggggtggttctgactcacaagagccttaccacgagcgtgggccagcaagtggatgg 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagggggtggttctgactcacaagagccttaccacgagcgtgggccagcaagtggatgg 300
Query: 762 agagaatccgaacctttctctgggaacagaggatgttctgctttgcgtgcttcccctgtt 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agagaatccgaacctttctctgggaacagaggatgttctgctttgcgtgcttcccctgtt 360
Query: 822 tcacattttctcgctgaacagcgttcttctctgcgcgctgagagcggggagcggtgtgct 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcacattttctcgctgaacagcgttcttctctgcgcgctgagagcggggagcggtgtgct 420
Query: 882 tctgatgccgaagtttgagatagggtcgttgctggagctgattcagaagcacagggtgtc 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctgatgccgaagtttgagatagggtcgttgctggagctgattcagaagcacagggtgtc 480
Query: 942 ggtggccatggtggtgccgccgctagtgctggctctggcgaagaatccgaaggtggcgga 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtggccatggtggtgccgccgctagtgctggctctggcgaagaatccgaaggtggcgga 540
Query: 1002 gtttgacctgagctccataaggttggtgctgtcaggggctgcgcctctcgggaaggagct 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtttgacctgagctccataaggttggtgctgtcaggggctgcgcctctcgggaaggagct 600
Query: 1062 cgaggaagctctccggagcagggtgcctcaagctgttttgggacagg 1108
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgaggaagctctccggagcagggtgcctcaagctgttttgggacagg 647
>gnl|LJGI|TC70657 homologue to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2;
n=1; Glycine max|Rep: 4-coumarate--CoA ligase 2 - Glycine
max (Soybean), partial (31%)
Length = 964
Score = 1072 bits (541), Expect = 0.0
Identities = 541/541 (100%)
Strand = Plus / Plus
Query: 1206 gagaaatgctgagctcaaggttcttgaccctgaaactggttgttctcttggctataatca 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gagaaatgctgagctcaaggttcttgaccctgaaactggttgttctcttggctataatca 148
Query: 1266 acccggtgaaatttgcatccgaggccaacagatcatgaaaggatatttgaacgatgagaa 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 acccggtgaaatttgcatccgaggccaacagatcatgaaaggatatttgaacgatgagaa 208
Query: 1326 ggccacagccacaacaattgatgcggaaggttggcttcacaccggtgatgttggttacat 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggccacagccacaacaattgatgcggaaggttggcttcacaccggtgatgttggttacat 268
Query: 1386 tgatgatgatgatgagattttcatagttgacagggtgaaggaactcatcaaattcaaagg 1445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgatgatgatgatgagattttcatagttgacagggtgaaggaactcatcaaattcaaagg 328
Query: 1446 cttccaagtgcccccagctgaactcgaaggccttctcgtaagccatccctcaattgcaga 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cttccaagtgcccccagctgaactcgaaggccttctcgtaagccatccctcaattgcaga 388
Query: 1506 tgcagctgtcgtcccacaaaaggatgctgctgctggtgaagttcccgttgcctttgttgt 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgcagctgtcgtcccacaaaaggatgctgctgctggtgaagttcccgttgcctttgttgt 448
Query: 1566 gagatcaaatgggtttgatctaactgaagaggctgtaaaggagttcatatccaaacaggt 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gagatcaaatgggtttgatctaactgaagaggctgtaaaggagttcatatccaaacaggt 508
Query: 1626 ggtgttttataaaagactgcacaaggtttactttgttcatgcaattcccaagtctccatc 1685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggtgttttataaaagactgcacaaggtttactttgttcatgcaattcccaagtctccatc 568
Query: 1686 aggaaagatattgaggaaagacctcagagcaaagctagaaaatggaaatcagaagccata 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aggaaagatattgaggaaagacctcagagcaaagctagaaaatggaaatcagaagccata 628
Query: 1746 g 1746
|
Sbjct: 629 g 629
>gnl|LJGI|TC76208 homologue to UniRef100_Q8S5C2 Cluster: 4-coumarate:CoA ligase
isoenzyme 3; n=1; Glycine max|Rep: 4-coumarate:CoA ligase
isoenzyme 3 - Glycine max (Soybean), partial (31%)
Length = 527
Score = 1045 bits (527), Expect = 0.0
Identities = 527/527 (100%)
Strand = Plus / Plus
Query: 863 gagcggggagcggtgtgcttctgatgccgaagtttgagatagggtcgttgctggagctga 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcggggagcggtgtgcttctgatgccgaagtttgagatagggtcgttgctggagctga 60
Query: 923 ttcagaagcacagggtgtcggtggccatggtggtgccgccgctagtgctggctctggcga 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcagaagcacagggtgtcggtggccatggtggtgccgccgctagtgctggctctggcga 120
Query: 983 agaatccgaaggtggcggagtttgacctgagctccataaggttggtgctgtcaggggctg 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaatccgaaggtggcggagtttgacctgagctccataaggttggtgctgtcaggggctg 180
Query: 1043 cgcctctcgggaaggagctcgaggaagctctccggagcagggtgcctcaagctgttttgg 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcctctcgggaaggagctcgaggaagctctccggagcagggtgcctcaagctgttttgg 240
Query: 1103 gacagggatacggaatgacggaggcagggccggttctgtccatgtccttaggatttgcaa 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacagggatacggaatgacggaggcagggccggttctgtccatgtccttaggatttgcaa 300
Query: 1163 agcaaccgttccccacaaagtcaggttcatgtggtactgttgtgagaaatgctgagctca 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcaaccgttccccacaaagtcaggttcatgtggtactgttgtgagaaatgctgagctca 360
Query: 1223 aggttcttgaccctgaaactggttgttctcttggctataatcaacccggtgaaatttgca 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggttcttgaccctgaaactggttgttctcttggctataatcaacccggtgaaatttgca 420
Query: 1283 tccgaggccaacagatcatgaaaggatatttgaacgatgagaaggccacagccacaacaa 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tccgaggccaacagatcatgaaaggatatttgaacgatgagaaggccacagccacaacaa 480
Query: 1343 ttgatgcggaaggttggcttcacaccggtgatgttggttacattgat 1389
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgatgcggaaggttggcttcacaccggtgatgttggttacattgat 527
>gnl|LJGI|TC76664 similar to UniRef100_Q8S5C2 Cluster: 4-coumarate:CoA ligase
isoenzyme 3; n=1; Glycine max|Rep: 4-coumarate:CoA
ligase isoenzyme 3 - Glycine max (Soybean), partial
(19%)
Length = 570
Score = 854 bits (431), Expect = 0.0
Identities = 438/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 1 atgttgtcagttgctccttctgttgatgccaaacagacctcaaccgcaccagaatcagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atgttgtcagttgctccttctgttgatgccaaacagacctcaaccgcaccagaatcagtg 191
Query: 61 tcaaatatttcagacaccaccccaacacaaaacgcatctaattcccaaactacccacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tcaaatatttcagacaccaccccaacacaaaacgcatctaattcccaaactacccacata 251
Query: 121 ttcaaatctaaattaccagacataccaatctccaaccaccttcccctccacgcttactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttcaaatctaaattaccagacataccaatctccaaccaccttcccctccacgcttactgc 311
Query: 181 ttcgagaatcttccacaattctccgaccgtccatgcctcatcctcggctccaccggaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ttcgagaatcttccacaattctccgaccgtccatgcctcatcctcggctccaccggaaaa 371
Query: 241 atctacacctacgcc-gagactcacctcctctcccgccgcgtcgccgccggaatgtccaa 299
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 atctacacctacgccggagactcacctcctctcccgccgcgtcgccgccggaatgtccaa 431
Query: 300 gctcggaatcaccaaaggcgatgtcgtcatgatccttctccaaaactccgctgaattcgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gctcggaatcaccaaaggcgatgtcgtcatgatccttctccaaaactccgctgaattcgt 491
Query: 360 cttctccttcttcgccgcctccatgatcggcgccgtcgccaccaccgccaacccgttcta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cttctccttcttcgccgcctccatgatcggcgccgtcgccaccaccgccaacccgttcta 551
Query: 420 caccaccgctgagcttttc 438
|||||||||||||||||||
Sbjct: 552 caccaccgctgagcttttc 570
>gnl|LJGI|FS350112 similar to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2; n=1;
Glycine max|Rep: 4-coumarate--CoA ligase 2 - Glycine max
(Soybean), partial (36%)
Length = 630
Score = 307 bits (155), Expect = 1e-82
Identities = 422/511 (82%)
Strand = Plus / Minus
Query: 941 cggtggccatggtggtgccgccgctagtgctggctctggcgaagaatccgaaggtggcgg 1000
||||||| ||||| ||||||||| | ||| |||| ||||||||| | |||| ||||| ||
Sbjct: 542 cggtggcgatggtagtgccgccgatggtggtggcgctggcgaaggacccgagggtggagg 483
Query: 1001 agtttgacctgagctccataaggttggtgctgtcaggggctgcgcctctcgggaaggagc 1060
||| |||||| ||||||||| |||||||| |||||||||||||||| || |||||||| |
Sbjct: 482 agtatgacctcagctccatacggttggtgatgtcaggggctgcgccgctggggaaggacc 423
Query: 1061 tcgaggaagctctccggagcagggtgcctcaagctgttttgggacagggatacggaatga 1120
| ||||| |||||||||||| || |||||| || |||||||||||||| || || ||||
Sbjct: 422 tggaggatgctctccggagccggttgcctcgcgcagttttgggacagggttatgggatga 363
Query: 1121 cggaggcagggccggttctgtccatgtccttaggatttgcaaagcaaccgttccccacaa 1180
| ||||| ||||||||| |||| |||| || || ||||| ||||| ||||| || || |
Sbjct: 362 cagaggcggggccggttttgtcaatgtgtttggggtttgcgaagcagccgtttccaacga 303
Query: 1181 agtcaggttcatgtggtactgttgtgagaaatgctgagctcaaggttcttgaccctgaaa 1240
|| |||| || || || || || ||||| ||||||||| | ||||| |||||||||| |
Sbjct: 302 agccagggtcgtgcggcacggtggtgaggaatgctgagttgaaggtgattgaccctgata 243
Query: 1241 ctggttgttctcttggctataatcaacccggtgaaatttgcatccgaggccaacagatca 1300
|||||| || || ||| | |||| || ||||||||||| |||||||| ||||
Sbjct: 242 gtggttgctccgttcctcgtaaccgctccggcgagatttgcatccgtggccaacaaatca 183
Query: 1301 tgaaaggatatttgaacgatgagaaggccacagccacaacaattgatgcggaaggttggc 1360
|||||||||| |||| |||||||||||||| || |||| |||||||| |||||||||
Sbjct: 182 tgaaaggatacctgaatgatgagaaggccactgcagcaactattgatgcacaaggttggc 123
Query: 1361 ttcacaccggtgatgttggttacattgatgatgatgatgagattttcatagttgacaggg 1420
||||||| ||||| ||||||| | ||||||||||||||||||||||| ||||| ||||
Sbjct: 122 ttcacactggtgacattggttatgtagatgatgatgatgagattttcattgttgataggg 63
Query: 1421 tgaaggaactcatcaaattcaaaggcttcca 1451
| ||||||||||||||||||||||| |||||
Sbjct: 62 ttaaggaactcatcaaattcaaaggtttcca 32
>gnl|LJGI|TC72583 homologue to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2;
n=1; Glycine max|Rep: 4-coumarate--CoA ligase 2 - Glycine
max (Soybean), partial (16%)
Length = 1000
Score = 250 bits (126), Expect = 3e-65
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 1621 caggtggtgttttataaaagactgcacaaggtttactttgttcatgcaattcccaagtct 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 caggtggtgttttataaaagactgcacaaggtttactttgttcatgcaattcccaagtct 700
Query: 1681 ccatcaggaaagatattgaggaaagacctcagagcaaagctagaaaatggaaatcagaag 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ccatcaggaaagatattgaggaaagacctcagagcaaagctagaaaatggaaatcagaag 760
Query: 1741 ccatag 1746
||||||
Sbjct: 761 ccatag 766
Score = 208 bits (105), Expect = 9e-53
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1521 acaaaaggatgctgctgctggtgaagttcccgttgcctttgttgtgagatcaaatgggtt 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acaaaaggatgctgctgctggtgaagttcccgttgcctttgttgtgagatcaaatgggtt 459
Query: 1581 tgatctaactgaagaggctgtaaaggagttcatatccaaacaggt 1625
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgatctaactgaagaggctgtaaaggagttcatatccaaacaggt 504
Score = 135 bits (68), Expect = 1e-30
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1453 gtgcccccagctgaactcgaaggccttctcgtaagccatccctcaattgcagatgcagct 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gtgcccccagctgaactcgaaggccttctcgtaagccatccctcaattgcagatgcagct 166
Query: 1513 gtcgtccc 1520
||||||||
Sbjct: 167 gtcgtccc 174
>gnl|LJGI|TC62381 homologue to UniRef100_Q8W558 Cluster: 4-coumarate:CoA ligase; n=1;
Amorpha fruticosa|Rep: 4-coumarate:CoA ligase - Amorpha
fruticosa, partial (59%)
Length = 1215
Score = 73.8 bits (37), Expect = 3e-12
Identities = 106/129 (82%)
Strand = Plus / Plus
Query: 1351 gaaggttggcttcacaccggtgatgttggttacattgatgatgatgatgagattttcata 1410
||||||||| | || || |||||| |||| ||||| || || ||||||||| | |||||
Sbjct: 567 gaaggttggttgcatacaggtgatattggatacatcgacgaagatgatgagttgttcatc 626
Query: 1411 gttgacagggtgaaggaactcatcaaattcaaaggcttccaagtgcccccagctgaactc 1470
||||| ||| |||||||| | ||||||| ||||| || |||||| | ||||||||||||
Sbjct: 627 gttgataggttgaaggaattgatcaaatataaaggttttcaagtggctccagctgaactc 686
Query: 1471 gaaggcctt 1479
|||| ||||
Sbjct: 687 gaagccctt 695
>gnl|LJGI|TC59755 homologue to UniRef100_Q8W558 Cluster: 4-coumarate:CoA ligase; n=1;
Amorpha fruticosa|Rep: 4-coumarate:CoA ligase - Amorpha
fruticosa, partial (34%)
Length = 833
Score = 67.9 bits (34), Expect = 2e-10
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 1376 ttggttacattgatgatgatgatgagattttcatagttgacagggtgaaggaactcatca 1435
||||||| ||||| |||||||||||| | ||||| ||||| ||| |||||||| | ||||
Sbjct: 195 ttggttatattgacgatgatgatgagttgttcatcgttgataggttgaaggaattgatca 254
Query: 1436 aattcaaaggcttccaagtgcccccagctgaactcgaaggccttct 1481
||| |||||| || || || | ||||||||||| |||| ||||||
Sbjct: 255 aatacaaaggatttcaggttgctccagctgaacttgaagcccttct 300
>gnl|LJGI|TC71364 similar to UniRef100_Q8W558 Cluster: 4-coumarate:CoA ligase; n=1;
Amorpha fruticosa|Rep: 4-coumarate:CoA ligase - Amorpha
fruticosa, partial (25%)
Length = 528
Score = 65.9 bits (33), Expect = 8e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 313 aaaggcgatgtcgtcatgatccttctccaaaactccgctgaattcgtcttctccttcttc 372
||||| || ||| |||||||||| |||| |||||| |||||||||||||||||||| ||
Sbjct: 317 aaaggagacgtcatcatgatcctcctccccaactcccctgaattcgtcttctccttcctc 376
Query: 373 gccgc 377
|||||
Sbjct: 377 gccgc 381