Miyakogusa Predicted Gene

Lj1g3v0129780.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0129780.1 Non Chatacterized Hit- tr|K4DDC0|K4DDC0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,63.01,4e-18,PARG_cat,Poly(ADP-ribose)
glycohydrolase,NODE_57825_length_377_cov_35.822281.path1.1
         (219 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81464 similar to UniRef100_A7QB18 Cluster: Chromosome...   426   e-119

>gnl|LJGI|TC81464 similar to UniRef100_A7QB18 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (35%)
          Length = 595

 Score =  426 bits (215), Expect = e-119
 Identities = 218/219 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcctcagggtgttgtttcattcgagcgaaaagtacttccgttggaagatgattatatt 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 126 atgcctcagggtgttgtttcattccagcgaaaagtacttccgttggaagatgattatatt 185

                                                                       
Query: 61  cacatttcttacccaaatgctgacgtttggagcacttctattataccattatgcagattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cacatttcttacccaaatgctgacgtttggagcacttctattataccattatgcagattt 245

                                                                       
Query: 121 gaggttcacagttcaggacttatagaagatcagttgagtgaagctgttgaagtggatttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gaggttcacagttcaggacttatagaagatcagttgagtgaagctgttgaagtggatttt 305

                                                  
Query: 181 gcaaatgaatatctaggtggtggtgctctccgcaggggc 219
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaaatgaatatctaggtggtggtgctctccgcaggggc 344