Miyakogusa Predicted Gene

Lj1g3v0129560.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0129560.1 tr|G7KA09|G7KA09_MEDTR Protein SMG9 OS=Medicago
truncatula GN=MTR_5g061700 PE=4
SV=1,59.63,4e-17,seg,NULL,NODE_80234_length_334_cov_96.335327.path1.1
         (315 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70941 weakly similar to UniRef100_A7PBC6 Cluster: Chr...   232   1e-60

>gnl|LJGI|TC70941 weakly similar to UniRef100_A7PBC6 Cluster: Chromosome chr16
           scaffold_10, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (21%)
          Length = 534

 Score =  232 bits (117), Expect = 1e-60
 Identities = 117/117 (100%)
 Strand = Plus / Plus

                                                                       
Query: 199 cagttgaggaagacactcatacagtacttcaaaccgtcttcttttgtgagggaacatgcc 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cagttgaggaagacactcatacagtacttcaaaccgtcttcttttgtgagggaacatgcc 60

                                                                    
Query: 259 gaacacaagcccgaggagcatatttcatcttctatggttcatgatagtcctatggat 315
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaacacaagcccgaggagcatatttcatcttctatggttcatgatagtcctatggat 117