Miyakogusa Predicted Gene

Lj1g3v0118830.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0118830.1 tr|D2VNY6|D2VNY6_NAEGR Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_70664 PE=4 SV=1,33.53,2e-16,no
description,Nucleotide-binding, alpha-beta plait; RNA-BINDING
PROTEIN,NULL; RNA recognition motif,CUFF.25259.1
         (1461 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69727 similar to UniRef100_A7PCC5 Cluster: Chromosome...   371   e-102

>gnl|LJGI|TC69727 similar to UniRef100_A7PCC5 Cluster: Chromosome chr2 scaffold_11,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_11, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (14%)
          Length = 647

 Score =  371 bits (187), Expect = e-102
 Identities = 190/191 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1271 cagggaccgtgcagctgagaggagaagtttgtatggctcatcatcgtcaattggaaatga 1330
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34   cagggaccgtgcggctgagaggagaagtttgtatggctcatcatcgtcaattggaaatga 93

                                                                        
Query: 1331 tttggaagaccttgatattggggattcaaatcgagatttcacgtcaaggaagggtgatcc 1390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94   tttggaagaccttgatattggggattcaaatcgagatttcacgtcaaggaagggtgatcc 153

                                                                        
Query: 1391 aatgccattccctcctggggttggtggagggcgcacagttggagatgtcaaccttgatac 1450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154  aatgccattccctcctggggttggtggagggcgcacagttggagatgtcaaccttgatac 213

                       
Query: 1451 ttttgaagtga 1461
            |||||||||||
Sbjct: 214  ttttgaagtga 224