Miyakogusa Predicted Gene
- Lj1g3v0117760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0117760.1 Non Chatacterized Hit- tr|A9NMG3|A9NMG3_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,40,8e-19,seg,NULL; coiled-coil,NULL,CUFF.25836.1
(486 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036246 similar to UniRef100_A7PB65 Cluster: Chromosom... 948 0.0
gnl|LJGI|TC60449 similar to UniRef100_A7PB65 Cluster: Chromosome... 948 0.0
gnl|LJGI|TC59333 similar to UniRef100_A7PB65 Cluster: Chromosome... 170 5e-42
>gnl|LJGI|GO036246 similar to UniRef100_A7PB65 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 648
Score = 948 bits (478), Expect = 0.0
Identities = 484/486 (99%)
Strand = Plus / Plus
Query: 1 atggcgacttctttcgcgccattctcgatttcaggtggatctcatcttaagccacctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggcgacttctttcgcgccattctcgatttcaggtggatctcatcttaagccacctgag 140
Query: 61 ttgtggttaaccaaacataattcatctggagttggacctaagttgacttttcaaaggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ttgtggttaaccaaacataattcatctggagttggacctaagttgacttttcaaaggaaa 200
Query: 121 tcaaaccatgtcagcaggaggaaccgcagctcatcgattcgggcagaatacggtgatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaaccatgtcagcaggaggaaccgcagctcatcgattcgggcagaatacggtgatagt 260
Query: 181 aaaggaggtggaggtggggattttgttgctggctttcttttgggtggtggtgtttttgga 240
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 261 aaaggaggtggaggtggggattttgttgctggctttcttctgggtggtgctgtttttgga 320
Query: 241 actctagcttacgtctttgctccccagatcagaaggtctctgctaaatgaagatgaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actctagcttacgtctttgctccccagatcagaaggtctctgctaaatgaagatgaatat 380
Query: 301 ggattccgcaaggccaagagaccaatatattatgacgaaggactagagaggaccagggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggattccgcaaggccaagagaccaatatattatgacgaaggactagagaggaccagggag 440
Query: 361 actttgaacgaaaagataagccaactaaattcggccattgataatgtatcttcacgtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actttgaacgaaaagataagccaactaaattcggccattgataatgtatcttcacgtttg 500
Query: 421 aggggtaacaataacgcgcctgctgcacagatagaaaatgatcctgaagtggaagctacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggggtaacaataacgcgcctgctgcacagatagaaaatgatcctgaagtggaagctacc 560
Query: 481 atgtaa 486
||||||
Sbjct: 561 atgtaa 566
>gnl|LJGI|TC60449 similar to UniRef100_A7PB65 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 747
Score = 948 bits (478), Expect = 0.0
Identities = 484/486 (99%)
Strand = Plus / Plus
Query: 1 atggcgacttctttcgcgccattctcgatttcaggtggatctcatcttaagccacctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atggcgacttctttcgcgccattctcgatttcaggtggatctcatcttaagccacctgag 95
Query: 61 ttgtggttaaccaaacataattcatctggagttggacctaagttgacttttcaaaggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ttgtggttaaccaaacataattcatctggagttggacctaagttgacttttcaaaggaaa 155
Query: 121 tcaaaccatgtcagcaggaggaaccgcagctcatcgattcgggcagaatacggtgatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tcaaaccatgtcagcaggaggaaccgcagctcatcgattcgggcagaatacggtgatagt 215
Query: 181 aaaggaggtggaggtggggattttgttgctggctttcttttgggtggtggtgtttttgga 240
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 216 aaaggaggtggaggtggggattttgttgctggctttcttctgggtggtgctgtttttgga 275
Query: 241 actctagcttacgtctttgctccccagatcagaaggtctctgctaaatgaagatgaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 actctagcttacgtctttgctccccagatcagaaggtctctgctaaatgaagatgaatat 335
Query: 301 ggattccgcaaggccaagagaccaatatattatgacgaaggactagagaggaccagggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggattccgcaaggccaagagaccaatatattatgacgaaggactagagaggaccagggag 395
Query: 361 actttgaacgaaaagataagccaactaaattcggccattgataatgtatcttcacgtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 actttgaacgaaaagataagccaactaaattcggccattgataatgtatcttcacgtttg 455
Query: 421 aggggtaacaataacgcgcctgctgcacagatagaaaatgatcctgaagtggaagctacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aggggtaacaataacgcgcctgctgcacagatagaaaatgatcctgaagtggaagctacc 515
Query: 481 atgtaa 486
||||||
Sbjct: 516 atgtaa 521
>gnl|LJGI|TC59333 similar to UniRef100_A7PB65 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 811
Score = 170 bits (86), Expect = 5e-42
Identities = 260/318 (81%)
Strand = Plus / Plus
Query: 163 gcagaatacggtgatagtaaaggaggtggaggtggggattttgttgctggctttcttttg 222
||||||||| |||||| || ||||||||||| || || || |||||||||||||| |
Sbjct: 222 gcagaataccgtgataatagtggaggtggaggaggcgacttcattgctggctttcttctt 281
Query: 223 ggtggtggtgtttttggaactctagcttacgtctttgctccccagatcagaaggtctctg 282
|| || | ||||||||||| |||| || | ||| |||||||||||||||| ||| ||
Sbjct: 282 ggaggggcgatttttggaactgtagcatatatattttctccccagatcagaagatctgtg 341
Query: 283 ctaaatgaagatgaatatggattccgcaaggccaagagaccaatatattatgacgaagga 342
|| ||||| ||||||||||||| ||||||||||| ||||| ||||||| || |||||
Sbjct: 342 cttaatgagaatgaatatggatttcgcaaggccaaaagacctgtatattacgatgaaggt 401
Query: 343 ctagagaggaccagggagactttgaacgaaaagataagccaactaaattcggccattgat 402
||||||||||||||||| | |||||| | || ||| || |||||||||| |||||||||
Sbjct: 402 ttagagaggaccagggagtcattgaacaagaaaataggcaaactaaattctgccattgat 461
Query: 403 aatgtatcttcacgtttgaggggtaacaataacgcgcctgctgcacagatagaaaatgat 462
|||| |||||||||||||| ||| ||| |||| ||||||| |||| ||| || |||
Sbjct: 462 gatgtttcttcacgtttgagaggtgccaagaacgtgcctgcttcacatgtaggaagtgac 521
Query: 463 cctgaagtggaagctacc 480
|||||||| ||| |||||
Sbjct: 522 cctgaagtagaatctacc 539