Miyakogusa Predicted Gene
- Lj1g3v0116700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0116700.1 Non Chatacterized Hit- tr|A9NMG3|A9NMG3_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,42.67,1e-18,coiled-coil,NULL; seg,NULL,CUFF.25829.1
(438 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036246 similar to UniRef100_A7PB65 Cluster: Chromosom... 868 0.0
gnl|LJGI|TC60449 similar to UniRef100_A7PB65 Cluster: Chromosome... 868 0.0
gnl|LJGI|TC59333 similar to UniRef100_A7PB65 Cluster: Chromosome... 174 3e-43
>gnl|LJGI|GO036246 similar to UniRef100_A7PB65 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 648
Score = 868 bits (438), Expect = 0.0
Identities = 438/438 (100%)
Strand = Plus / Plus
Query: 1 atggcgacttctttcgcgccattctcgatttcaggtggatctcatcttaagccacctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggcgacttctttcgcgccattctcgatttcaggtggatctcatcttaagccacctgag 140
Query: 61 ttgtggttaaccaaacataattcatctggagttggacctaagttgacttttcaaaggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ttgtggttaaccaaacataattcatctggagttggacctaagttgacttttcaaaggaaa 200
Query: 121 tcaaaccatgtcagcaggaggaaccgcagctcatcgattcgggcagaatacggtgatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaaccatgtcagcaggaggaaccgcagctcatcgattcgggcagaatacggtgatagt 260
Query: 181 aaaggaggtggaggtggggattttgttgctggctttcttctgggtggtgctgtttttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggaggtggaggtggggattttgttgctggctttcttctgggtggtgctgtttttgga 320
Query: 241 actctagcttacgtctttgctccccagatcagaaggtctctgctaaatgaagatgaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actctagcttacgtctttgctccccagatcagaaggtctctgctaaatgaagatgaatat 380
Query: 301 ggattccgcaaggccaagagaccaatatattatgacgaaggactagagaggaccagggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggattccgcaaggccaagagaccaatatattatgacgaaggactagagaggaccagggag 440
Query: 361 actttgaacgaaaagataagccaactaaattcggccattgataatgtatcttcacgtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actttgaacgaaaagataagccaactaaattcggccattgataatgtatcttcacgtttg 500
Query: 421 aggggtaacaataacgcg 438
||||||||||||||||||
Sbjct: 501 aggggtaacaataacgcg 518
>gnl|LJGI|TC60449 similar to UniRef100_A7PB65 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 747
Score = 868 bits (438), Expect = 0.0
Identities = 438/438 (100%)
Strand = Plus / Plus
Query: 1 atggcgacttctttcgcgccattctcgatttcaggtggatctcatcttaagccacctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atggcgacttctttcgcgccattctcgatttcaggtggatctcatcttaagccacctgag 95
Query: 61 ttgtggttaaccaaacataattcatctggagttggacctaagttgacttttcaaaggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ttgtggttaaccaaacataattcatctggagttggacctaagttgacttttcaaaggaaa 155
Query: 121 tcaaaccatgtcagcaggaggaaccgcagctcatcgattcgggcagaatacggtgatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tcaaaccatgtcagcaggaggaaccgcagctcatcgattcgggcagaatacggtgatagt 215
Query: 181 aaaggaggtggaggtggggattttgttgctggctttcttctgggtggtgctgtttttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 aaaggaggtggaggtggggattttgttgctggctttcttctgggtggtgctgtttttgga 275
Query: 241 actctagcttacgtctttgctccccagatcagaaggtctctgctaaatgaagatgaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 actctagcttacgtctttgctccccagatcagaaggtctctgctaaatgaagatgaatat 335
Query: 301 ggattccgcaaggccaagagaccaatatattatgacgaaggactagagaggaccagggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggattccgcaaggccaagagaccaatatattatgacgaaggactagagaggaccagggag 395
Query: 361 actttgaacgaaaagataagccaactaaattcggccattgataatgtatcttcacgtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 actttgaacgaaaagataagccaactaaattcggccattgataatgtatcttcacgtttg 455
Query: 421 aggggtaacaataacgcg 438
||||||||||||||||||
Sbjct: 456 aggggtaacaataacgcg 473
>gnl|LJGI|TC59333 similar to UniRef100_A7PB65 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 811
Score = 174 bits (88), Expect = 3e-43
Identities = 217/260 (83%)
Strand = Plus / Plus
Query: 163 gcagaatacggtgatagtaaaggaggtggaggtggggattttgttgctggctttcttctg 222
||||||||| |||||| || ||||||||||| || || || ||||||||||||||||
Sbjct: 222 gcagaataccgtgataatagtggaggtggaggaggcgacttcattgctggctttcttctt 281
Query: 223 ggtggtgctgtttttggaactctagcttacgtctttgctccccagatcagaaggtctctg 282
|| || || ||||||||||| |||| || | ||| |||||||||||||||| ||| ||
Sbjct: 282 ggaggggcgatttttggaactgtagcatatatattttctccccagatcagaagatctgtg 341
Query: 283 ctaaatgaagatgaatatggattccgcaaggccaagagaccaatatattatgacgaagga 342
|| ||||| ||||||||||||| ||||||||||| ||||| ||||||| || |||||
Sbjct: 342 cttaatgagaatgaatatggatttcgcaaggccaaaagacctgtatattacgatgaaggt 401
Query: 343 ctagagaggaccagggagactttgaacgaaaagataagccaactaaattcggccattgat 402
||||||||||||||||| | |||||| | || ||| || |||||||||| |||||||||
Sbjct: 402 ttagagaggaccagggagtcattgaacaagaaaataggcaaactaaattctgccattgat 461
Query: 403 aatgtatcttcacgtttgag 422
|||| ||||||||||||||
Sbjct: 462 gatgtttcttcacgtttgag 481