Miyakogusa Predicted Gene
- Lj1g3v0116680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0116680.1 Non Chatacterized Hit- tr|I1LFW6|I1LFW6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48213
PE,62.77,0,FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type; seg,NULL;
no description,Zinc finger, RING/FYVE/PHD,CUFF.25827.1
(4461 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80818 similar to UniRef100_Q9J9L7 Cluster: Polyprotei... 971 0.0
gnl|LJGI|TC70280 weakly similar to UniRef100_A1WPT1 Cluster: Str... 652 0.0
gnl|LJGI|TC70336 553 e-156
gnl|LJGI|CN824943 similar to UniRef100_A7PB64 Cluster: Chromosom... 434 e-120
gnl|LJGI|AU251411 UniRef100_A5WHN9 Cluster: Oligopeptidase A; n=... 119 2e-25
gnl|LJGI|BW595914 similar to UniRef100_A9VE72 Cluster: Predicted... 56 2e-06
>gnl|LJGI|TC80818 similar to UniRef100_Q9J9L7 Cluster: Polyprotein; n=2; Human
coxsackievirus B4|Rep: Polyprotein - Human coxsackievirus
B4, partial (9%)
Length = 533
Score = 971 bits (490), Expect = 0.0
Identities = 490/490 (100%)
Strand = Plus / Plus
Query: 3324 caccgggtcaacatcaagggttccaagaagcaacaacctgttgtgtcaagaaatgaaacc 3383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caccgggtcaacatcaagggttccaagaagcaacaacctgttgtgtcaagaaatgaaacc 60
Query: 3384 cactgtttcgtccctggaagctcgtgtactagaacacggacactgcagagaggctacacc 3443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cactgtttcgtccctggaagctcgtgtactagaacacggacactgcagagaggctacacc 120
Query: 3444 tcctgaaacaatggggacaagcttaagtagtaggactgttgaaacaagttctgattttga 3503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcctgaaacaatggggacaagcttaagtagtaggactgttgaaacaagttctgattttga 180
Query: 3504 tgtttctgtcaagcaagagaatgtcctatcttcgacaattccttctgttggcaaccaaga 3563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtttctgtcaagcaagagaatgtcctatcttcgacaattccttctgttggcaaccaaga 240
Query: 3564 aagagatgctagtaaggatgaaattttggaggaaatgaattgtgatgaagaccaacaaag 3623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagagatgctagtaaggatgaaattttggaggaaatgaattgtgatgaagaccaacaaag 300
Query: 3624 gcctgaaaggaaacagaaagaagatgctcgctgtattgatttggaagaaactattattga 3683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcctgaaaggaaacagaaagaagatgctcgctgtattgatttggaagaaactattattga 360
Query: 3684 cattcaagaaacagtttcagcaagcattattagtgaggataaagtttcagaaagaatgag 3743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cattcaagaaacagtttcagcaagcattattagtgaggataaagtttcagaaagaatgag 420
Query: 3744 cagtgatgaagatcagcaatggtctaagagtaaacgaaaagatgattactatattgactt 3803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagtgatgaagatcagcaatggtctaagagtaaacgaaaagatgattactatattgactt 480
Query: 3804 ggaggcaact 3813
||||||||||
Sbjct: 481 ggaggcaact 490
>gnl|LJGI|TC70280 weakly similar to UniRef100_A1WPT1 Cluster: Stringent starvation
protein B; n=1; Verminephrobacter eiseniae EF01-2|Rep:
Stringent starvation protein B - Verminephrobacter
eiseniae (strain EF01-2), partial (12%)
Length = 697
Score = 652 bits (329), Expect = 0.0
Identities = 355/365 (97%), Gaps = 9/365 (2%)
Strand = Plus / Plus
Query: 4097 ttcctgttgatacacagaacattagtggctcaaagttgttgaatagcatgccattgaaag 4156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcctgttgatacacagaacattagtggctcaaagttgttgaatagcatgccattgaaag 60
Query: 4157 ggcttcatgctgaccgatttcgagatgggattccaaatctagagcttgcattaggcggtg 4216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcttcatgctgaccgatttcgagatgggattccaaatctagagcttgcattaggcggtg 120
Query: 4217 aaacaaaacctccgccaccaccgccaccaccgccacctgcccctaagggcatgctgcctt 4276
||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaacaaaacctccgc---------caccaccgccacctgcccctaagggcatgctgcctt 171
Query: 4277 tcctagttggggcagtagagagaaaaaataaccctgcagatagcttggcagatgagcagg 4336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tcctagttggggcagtagagagaaaaaataaccctgcagatagcttggcagatgagcagg 231
Query: 4337 aggatgctgcatctctttctctttctctgtcattcccatcttcaaataaggaacacaaaa 4396
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 232 aggatgctgcatctctttctctttctctgtcattcccatcttcaaataaggaacaccaaa 291
Query: 4397 aagttgatggtaaccatgtgaataccccgtttctcctttttgggagattcacagacaaat 4456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aagttgatggtaaccatgtgaataccccgtttctcctttttgggagattcacagacaaat 351
Query: 4457 aaata 4461
|||||
Sbjct: 352 aaata 356
>gnl|LJGI|TC70336
Length = 589
Score = 553 bits (279), Expect = e-156
Identities = 288/291 (98%)
Strand = Plus / Plus
Query: 4171 cgatttcgagatgggattccaaatctagagcttgcattaggcggtgaaacaaaacctccg 4230
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 cgatttcgagatgggattccaaatctagagcttgcattaggcggtgaaacaaaacttccg 60
Query: 4231 ccaccaccgccaccaccgccacctgcccctaagggcatgctgcctttcctagttggggca 4290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaccaccgccaccaccgccacctgcccctaagggcatgctgcctttcctagttggggca 120
Query: 4291 gtagagagaaaaaataaccctgcagatagcttggcagatgagcaggaggatgctgcatct 4350
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 gtagagagaaaaaataaccctgcagatagcttggcagatgagccggaggatgctgcatct 180
Query: 4351 ctttctctttctctgtcattcccatcttcaaataaggaacacaaaaaagttgatggtaac 4410
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 ctttctctttctctgtcattcccatcttcaaataaggaacaccaaaaagttgatggtaac 240
Query: 4411 catgtgaataccccgtttctcctttttgggagattcacagacaaataaata 4461
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catgtgaataccccgtttctcctttttgggagattcacagacaaataaata 291
>gnl|LJGI|CN824943 similar to UniRef100_A7PB64 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 705
Score = 434 bits (219), Expect = e-120
Identities = 437/509 (85%), Gaps = 3/509 (0%)
Strand = Plus / Plus
Query: 2592 ctcaagtgttctttcaaagacgttggcttttcccgaatatcaatacatctggcagggtgt 2651
||||| |||| |||||||||||| ||| |||| ||||| |||||||||||||||||||
Sbjct: 30 ctcaaatgttatttcaaagacgtcagctattccagaatacaaatacatctggcagggtgt 89
Query: 2652 ctttgaagtgcatagaaatgaaaagccccctgacttatgtacaggagttcaggcacattt 2711
||||||||||||||||| || |||||| |||||||| | ||| ||| |||| ||||||||
Sbjct: 90 ctttgaagtgcatagaagtggaaagcctcctgacttgtatactggaattcaagcacattt 149
Query: 2712 atcctcttgtgcttcgcccaaagttcttgaggtagtgaccaagtttctacccaaagtttc 2771
|||||| |||||||| || || |||||||| || |||| ||| ||| |||| |||||||
Sbjct: 150 atcctcatgtgcttctccaaaggttcttgacgttgtgaacaaatttttacctgaagtttc 209
Query: 2772 cctcagcgaagtttctcggttgagcacatggccttcacaatttcatcatggtggtgttag 2831
|| ||||||||||| ||||||||||||||||||||||||||||| ||||| | |
Sbjct: 210 tctacatgaagtttctcgcttgagcacatggccttcacaatttcatcaaggtggaggttc 269
Query: 2832 t---gaagataatattgctctttacttctttgccagagatgttgaaagttacgagagaca 2888
| |||||||||||||| |||||||||||||| | ||| |||||||||| |||||| |
Sbjct: 270 taaagaagataatattgccctttacttctttgctaaagacattgaaagttatgagagata 329
Query: 2889 ctacaagggcctattggatcacatggctagaaatgatttagcacttaaaggactttttga 2948
|||||| | ||||||||||||||| || ||||||||||||||||||||| ||||||
Sbjct: 330 ttacaagagtctattggatcacatgattaaaaatgatttagcacttaaagggacttttga 389
Query: 2949 tggtgttgaactgctcatattcccgtccaatcagcttcctgaaaattcacaacggtggaa 3008
|||||||||||| |||||||| | |||||||||||||||||||||||||| || |||||
Sbjct: 390 tggtgttgaacttctcatatttacatccaatcagcttcctgaaaattcacagcgttggaa 449
Query: 3009 catgttgtttttcttatggggcgtatttagggggaggcagatcaatcattcagattctgc 3068
| ||||||||||||||||||| ||||||| || ||| ||| |||||||||||||||||
Sbjct: 450 tacgttgtttttcttatggggcatatttagaggaaggaggattaatcattcagattctgc 509
Query: 3069 aaaaaagatttgcattcccagtttgaatg 3097
|||||||||||| ||||||||||||||||
Sbjct: 510 aaaaaagatttgtattcccagtttgaatg 538
>gnl|LJGI|AU251411 UniRef100_A5WHN9 Cluster: Oligopeptidase A; n=1; Psychrobacter sp.
PRwf-1|Rep: Oligopeptidase A - Psychrobacter sp., partial
(1%)
Length = 392
Score = 119 bits (60), Expect = 2e-25
Identities = 258/324 (79%)
Strand = Plus / Plus
Query: 2179 gtcactgcctcaagtagtttaaaagaggagatgcataaaggcaatggattgaaagctgca 2238
|||| |||| ||||||||| ||||||||| |||||||| || ||| | ||||||||||||
Sbjct: 68 gtcaatgccacaagtagttcaaaagaggaaatgcataatggtaatagtttgaaagctgca 127
Query: 2239 atccaagctgctttgcgtagaaggcctgaaatttacaaaaagaaagaagtacctaatcaa 2298
||||| || ||||||| ||||||||||||||| |||| |||||||| |||||| | | |
Sbjct: 128 atccacgcagctttgcttagaaggcctgaaatacacaagaagaaagatgtacctgagcga 187
Query: 2299 actgatgaagtttccacatcaggaagagagttaaactgtgaagtgactttgcaagaccaa 2358
|| | ||| || |||| ||||| | ||| || || |||||||| | || ||||||| |
Sbjct: 188 acaggtgagtttcccacttcaggcacagacttgaaatgtgaagtcagttatcaagaccga 247
Query: 2359 gtgttggtttctagatcaccaaagaatagtatatctgctgaagaaacccgtgagcaactg 2418
|||| |||||| | ||| || |||||||||||| ||||||||||| || | | |
Sbjct: 248 gtgtcggtttccaacacactgaaaaatagtatatctactgaagaaaccaatgcaaagcag 307
Query: 2419 gaaattcttgagagttctgcatctgactcttccaaatgttcatctgccaatgatttaaag 2478
|||| ||||| | |||| ||| ||| |||||||||||| |||||| || ||||||||
Sbjct: 308 gaaacccttgacaattctacatttgaaacttccaaatgtttatctgctaacaatttaaag 367
Query: 2479 caacttaaatcttgtccatctgat 2502
|||||| | | ||||||| |||||
Sbjct: 368 caacttcacttttgtccagctgat 391
>gnl|LJGI|BW595914 similar to UniRef100_A9VE72 Cluster: Predicted protein; n=1; Monosiga
brevicollis MX1|Rep: Predicted protein - Monosiga
brevicollis MX1, partial (12%)
Length = 539
Score = 56.0 bits (28), Expect = 2e-06
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 3606 tgatgaagaccaacaaaggcctgaaaggaaacagaaagaagatg 3649
||||||| | |||||||||||| |||||||||||| ||||||||
Sbjct: 201 tgatgaaaatcaacaaaggcctaaaaggaaacagatagaagatg 244