Miyakogusa Predicted Gene
- Lj1g3v0116370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0116370.1 Non Chatacterized Hit- tr|C6SW24|C6SW24_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.518
PE=2,95.07,0,PROTEASOME SUBUNIT BETA TYPE 2,NULL; PROTEASOME SUBUNIT
ALPHA/BETA,NULL; Proteasome,Proteasome, subu,CUFF.25244.1
(624 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75588 1229 0.0
gnl|LJGI|BW611840 765 0.0
gnl|LJGI|BW599904 similar to UniRef100_O24633 Cluster: Proteasom... 309 1e-83
>gnl|LJGI|TC75588
Length = 965
Score = 1229 bits (620), Expect = 0.0
Identities = 623/624 (99%)
Strand = Plus / Plus
Query: 1 atggagtgcgtgtttggattggttggcaatggcttcgccatcgttgcggcggatacatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 atggagtgcgtgtttggattggttggcaatggcttcgccatcgttgcggcggatacatcg 116
Query: 61 gcggtgcacagcatcctcgttcacaagtccgacgaggacaagatcatgcttctcgattcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 117 gcggtgcacagcatcctcgttcacaagtccgacgaggacaagatcatgctcctcgattcc 176
Query: 121 cacaagctcgtcgccgccagcggagaggccggtgacagggttcagttcacggagtacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cacaagctcgtcgccgccagcggagaggccggtgacagggttcagttcacggagtacatt 236
Query: 181 cagaagaacgtggccttgtaccagttccgtaatggaatccctttgaccaccgccgctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 cagaagaacgtggccttgtaccagttccgtaatggaatccctttgaccaccgccgctgct 296
Query: 241 gccaatttcactcgtggcgagctcgccactgctcttcgcaagaacccatactctgtgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gccaatttcactcgtggcgagctcgccactgctcttcgcaagaacccatactctgtgaac 356
Query: 301 atccttcttgctggttatgacaaagagactggcccatcactatactatattgactacatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 atccttcttgctggttatgacaaagagactggcccatcactatactatattgactacatt 416
Query: 361 gcaacacttcacaagcttgagaagggggcttttggctatggctcgtatttttcactgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gcaacacttcacaagcttgagaagggggcttttggctatggctcgtatttttcactgtca 476
Query: 421 atgatggacagacactaccatagcggaatgtcagtggaagaagcaattgatctcgttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 atgatggacagacactaccatagcggaatgtcagtggaagaagcaattgatctcgttgat 536
Query: 481 aagtgcattcatgaaatcaggtcaaggttggttgtggcaccacccaactttgttatcaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aagtgcattcatgaaatcaggtcaaggttggttgtggcaccacccaactttgttatcaaa 596
Query: 541 attgttgacaaggatggtgcaagagagtacgcatggcgccaatctgtcaaggatactcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 attgttgacaaggatggtgcaagagagtacgcatggcgccaatctgtcaaggatactcct 656
Query: 601 gctcctgctcctccagcttgagtt 624
||||||||||||||||||||||||
Sbjct: 657 gctcctgctcctccagcttgagtt 680
>gnl|LJGI|BW611840
Length = 485
Score = 765 bits (386), Expect = 0.0
Identities = 389/390 (99%)
Strand = Plus / Plus
Query: 1 atggagtgcgtgtttggattggttggcaatggcttcgccatcgttgcggcggatacatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atggagtgcgtgtttggattggttggcaatggcttcgccatcgttgcggcggatacatcg 155
Query: 61 gcggtgcacagcatcctcgttcacaagtccgacgaggacaagatcatgcttctcgattcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 156 gcggtgcacagcatcctcgttcacaagtccgacgaggacaagatcatgctcctcgattcc 215
Query: 121 cacaagctcgtcgccgccagcggagaggccggtgacagggttcagttcacggagtacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cacaagctcgtcgccgccagcggagaggccggtgacagggttcagttcacggagtacatt 275
Query: 181 cagaagaacgtggccttgtaccagttccgtaatggaatccctttgaccaccgccgctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cagaagaacgtggccttgtaccagttccgtaatggaatccctttgaccaccgccgctgct 335
Query: 241 gccaatttcactcgtggcgagctcgccactgctcttcgcaagaacccatactctgtgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gccaatttcactcgtggcgagctcgccactgctcttcgcaagaacccatactctgtgaac 395
Query: 301 atccttcttgctggttatgacaaagagactggcccatcactatactatattgactacatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atccttcttgctggttatgacaaagagactggcccatcactatactatattgactacatt 455
Query: 361 gcaacacttcacaagcttgagaagggggct 390
||||||||||||||||||||||||||||||
Sbjct: 456 gcaacacttcacaagcttgagaagggggct 485
>gnl|LJGI|BW599904 similar to UniRef100_O24633 Cluster: Proteasome subunit beta
type-2-B; n=2; Arabidopsis thaliana|Rep: Proteasome
subunit beta, partial (41%)
Length = 486
Score = 309 bits (156), Expect = 1e-83
Identities = 210/228 (92%)
Strand = Plus / Plus
Query: 166 ttcacggagtacattcagaagaacgtggccttgtaccagttccgtaatggaatccctttg 225
|||||| ||||| ||| |||| |||| ||| || ||| |||| ||| |||||| |||||
Sbjct: 259 ttcacgaagtactttcctaagaccgtgtcctagtcccatttccctaagggaatctctttg 318
Query: 226 accaccgccgctgctgccaatttcactcgtggcgagctcgccactgctcttcgcaagaac 285
||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 319 accacagccgctgctgctggtttctttcgtggcgagctcgccactgctcttcgcaagaac 378
Query: 286 ccatactctgtgaacatccttcttgctggttatgacaaagagactggcccatcactatac 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccatactctgtgaacatccttcttgctggttatgacaaagagactggcccatcactatac 438
Query: 346 tatattgactacattgcaacacttcacaagcttgagaagggggctttt 393
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tatattgactacattgcaacacttcacaagcttgagaagggggctttt 486