Miyakogusa Predicted Gene
- Lj1g3v0114190.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0114190.2 Non Chatacterized Hit- tr|I1KKG6|I1KKG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23437
PE,69.97,0,SCO1-SenC,Copper chaperone SCO1/SenC;
Thioredoxin-like,Thioredoxin-like fold; SCO1/SENC,Copper
chape,CUFF.25230.2
(975 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76605 similar to UniRef100_A7QHP1 Cluster: Chromosome... 1285 0.0
gnl|LJGI|TC82551 similar to UniRef100_A7QHP1 Cluster: Chromosome... 478 e-134
gnl|LJGI|TC67228 similar to UniRef100_A7QHP1 Cluster: Chromosome... 478 e-134
gnl|LJGI|TC79081 similar to UniRef100_A7Q9Q5 Cluster: Chromosome... 155 6e-37
gnl|LJGI|TC71286 58 1e-07
>gnl|LJGI|TC76605 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 1232
Score = 1285 bits (648), Expect = 0.0
Identities = 787/831 (94%), Gaps = 8/831 (0%)
Strand = Plus / Plus
Query: 143 tggttgggaatcaaggttttggtaatggagttttgttgacgtgtcagaggtttctatcta 202
|||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||
Sbjct: 174 tggttgggaatcaaggttttggtaatggggttttggtgatgtgtcagaggtttctatcta 233
Query: 203 gtaaggctgcgcccagtactactaatcaagaaaaacctgcatcagataactcttcaaagg 262
|| ||||| | | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 234 gtgctgctgc------tgattctaatcaagaaaaacctgcatcagataactcctcaaagg 287
Query: 263 atgattctggtcaaggaaaagagtctggaggagaacagggtcagaaaactgatgctggga 322
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 288 atgattctggtcaaggaaaagagtctggaggagaacaggatcagaaaagtgatgctggga 347
Query: 323 aagctgttcgcggatcgcctgtttcttggttgagctttgttttgctggttttaactggag 382
|| || | |||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 348 aatctatccgcggatcgcctatttcatggttgagctttgttttgctggttttaactggag 407
Query: 383 ctggattggtattttactatgacagagaaaagaaacgacatattgaagacatacatagtg 442
| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 408 cgggagtggtattttactatgacagagaaaagaaacgacatattgaagacataaataatg 467
Query: 443 cttcggaggcagtgaagcatggaccttctgcgggaaaagctgcaattgggggtccatttc 502
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 468 cttcagaggcagtgaagcatggaccttccgcgggaaaagctgcaattgggggtccatttc 527
Query: 503 accttaccaaccatcacgggaagcgcgttactgaaaaggacttcttggggaagtggacag 562
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 528 accttaccaaccatcatgggaagcgcgttactgaaaaggacttcttgggaaagtggacag 587
Query: 563 tgatgtatttt-ggatttactcactgcccagatatctgccctgatgaactacagaa-gtt 620
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 588 tgatgtatttttggatttactcactgcccagatatctgccctgatgaacttcagaaagtt 647
Query: 621 agcagatgcagttgataaaataaaggagaaatctggaattgaaattgtaccagtttttat 680
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 648 agcagttgcagttgataaaataaaggagaaatctggaattgaaattgtgccagtttttat 707
Query: 681 ctctgttgatcctgagagggataccgttgagcaagtcggtgaatacgtcaaagaatttca 740
|||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 708 ctctgttgatcctgagaggggtaccgttgagcaagtcagtgaatacgtcaaagaatttct 767
Query: 741 tccaaagttaattggattaactggtagctcagatgagataaagagcgtagctcgtgcata 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 tccaaagttaattggattaactggtagctcagatgagataaagagcgtagctcgtgcata 827
Query: 801 tcgtgtttattacatgaagacagcagaggaagactcagattatcttgttgatcactccat 860
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 828 tcgtgtttattacatgaagacagcagaagaggactcagattatcttgttgatcactccat 887
Query: 861 agttatgtacttgatggggcctgacatgaattttgttaagtttttcggcaagaacaatga 920
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 888 agttatgtacttgatggggcctgacatgaattatgtaaagtttttcggcaagaacaatga 947
Query: 921 tgctgactcacttgctgatggaataattaaagagataaagcagtataagaa 971
||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 948 tgctgactcacttgctgatggaatagttaaagagataaagcagtataagaa 998
>gnl|LJGI|TC82551 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 572
Score = 478 bits (241), Expect = e-134
Identities = 289/305 (94%)
Strand = Plus / Plus
Query: 339 gcctgtttcttggttgagctttgttttgctggttttaactggagctggattggtatttta 398
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 118 gcctgtttcgtggttgagctttgttttgctggttttaactggagcaggattggtatttta 177
Query: 399 ctatgacagagaaaagaaacgacatattgaagacatacatagtgcttcggaggcagtgaa 458
||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct: 178 ctatgacagagaaaagaaacgacatattgaagacatacataatgcttagaaggcagtgaa 237
Query: 459 gcatggaccttctgcgggaaaagctgcaattgggggtccatttcaccttaccaaccatca 518
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gcctggaccttatgcgggaaaagctgcaattgggggtccatttcaccttaccaaccatca 297
Query: 519 cgggaagcgcgttactgaaaaggacttcttggggaagtggacagtgatgtattttggatt 578
||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 298 tgggaagcacgttactgtaaaggacttcttgggaaagtggacagtgatgtattttggatt 357
Query: 579 tactcactgcccagatatctgccctgatgaactacagaagttagcagatgcagttgataa 638
|| |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 358 tagtcactgcccaagtatctgctctgatgaactacataagttagcagatgcagttgataa 417
Query: 639 aataa 643
|||||
Sbjct: 418 aataa 422
>gnl|LJGI|TC67228 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 856
Score = 478 bits (241), Expect = e-134
Identities = 289/305 (94%)
Strand = Plus / Plus
Query: 339 gcctgtttcttggttgagctttgttttgctggttttaactggagctggattggtatttta 398
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 188 gcctgtttcgtggttgagctttgttttgctggttttaactggagcaggattggtatttta 247
Query: 399 ctatgacagagaaaagaaacgacatattgaagacatacatagtgcttcggaggcagtgaa 458
||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct: 248 ctatgacagagaaaagaaacgacatattgaagacatacataatgcttagaaggcagtgaa 307
Query: 459 gcatggaccttctgcgggaaaagctgcaattgggggtccatttcaccttaccaaccatca 518
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcctggaccttatgcgggaaaagctgcaattgggggtccatttcaccttaccaaccatcc 367
Query: 519 cgggaagcgcgttactgaaaaggacttcttggggaagtggacagtgatgtattttggatt 578
||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 368 tgggaagcacgttactgtaaaggacttcttgggaaagtggacagtgatgtattttggatt 427
Query: 579 tactcactgcccagatatctgccctgatgaactacagaagttagcagatgcagttgataa 638
|| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 428 tagtcactgcccaagtatctgccctgatgaactacataagttagcagatgcagttgataa 487
Query: 639 aataa 643
|||||
Sbjct: 488 aataa 492
>gnl|LJGI|TC79081 similar to UniRef100_A7Q9Q5 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 1317
Score = 155 bits (78), Expect = 6e-37
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 1 atgtggaggtggacgtcaccgcaaatctcttatctcgttgctagattgagtcaagtgaaa 60
|||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 97 atgtggcggtggacgtcaccgcgaatctcttatctcgttggaagattgagtcaagtgaaa 156
Query: 61 ctgagtgatggccgttgctgttacagtcaattgttgca 98
||||||||||| ||||||||||||||||||||||||||
Sbjct: 157 ctgagtgatggtcgttgctgttacagtcaattgttgca 194
>gnl|LJGI|TC71286
Length = 795
Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 615 gaagttagcagatgcagttgataaaataa 643
|||||||||||||||||||||||||||||
Sbjct: 1 gaagttagcagatgcagttgataaaataa 29