Miyakogusa Predicted Gene
- Lj1g3v0114190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0114190.1 Non Chatacterized Hit- tr|I1KKG6|I1KKG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23437
PE,69.03,0,SCO1-SenC,Copper chaperone SCO1/SenC;
Thioredoxin-like,Thioredoxin-like fold; SCO1/SENC,Copper
chape,CUFF.25230.1
(1002 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76605 similar to UniRef100_A7QHP1 Cluster: Chromosome... 1281 0.0
gnl|LJGI|TC82551 similar to UniRef100_A7QHP1 Cluster: Chromosome... 478 e-134
gnl|LJGI|TC67228 similar to UniRef100_A7QHP1 Cluster: Chromosome... 478 e-134
gnl|LJGI|TC79081 similar to UniRef100_A7Q9Q5 Cluster: Chromosome... 155 6e-37
gnl|LJGI|TC71286 58 1e-07
>gnl|LJGI|TC76605 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 1232
Score = 1281 bits (646), Expect = 0.0
Identities = 785/829 (94%), Gaps = 8/829 (0%)
Strand = Plus / Plus
Query: 172 gttgggaatcaaggttttggtaatggagttttgttgacgtgtcagaggtttctatctagt 231
|||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||
Sbjct: 176 gttgggaatcaaggttttggtaatggggttttggtgatgtgtcagaggtttctatctagt 235
Query: 232 aaggctgcgcccagtactactaatcaagaaaaacctgcatcagataactcttcaaaggat 291
||||| | | ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 236 gctgctgc------tgattctaatcaagaaaaacctgcatcagataactcctcaaaggat 289
Query: 292 gattctggtcaaggaaaagagtctggaggagaacagggtcagaaaactgatgctgggaaa 351
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 290 gattctggtcaaggaaaagagtctggaggagaacaggatcagaaaagtgatgctgggaaa 349
Query: 352 gctgttcgcggatcgcctgtttcttggttgagctttgttttgctggttttaactggagct 411
|| | |||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 350 tctatccgcggatcgcctatttcatggttgagctttgttttgctggttttaactggagcg 409
Query: 412 ggattggtattttactatgacagagaaaagaaacgacatattgaagacatacatagtgct 471
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 410 ggagtggtattttactatgacagagaaaagaaacgacatattgaagacataaataatgct 469
Query: 472 tcggaggcagtgaagcatggaccttctgcgggaaaagctgcaattgggggtccatttcac 531
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 470 tcagaggcagtgaagcatggaccttccgcgggaaaagctgcaattgggggtccatttcac 529
Query: 532 cttaccaaccatcacgggaagcgcgttactgaaaaggacttcttggggaagtggacagtg 591
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 530 cttaccaaccatcatgggaagcgcgttactgaaaaggacttcttgggaaagtggacagtg 589
Query: 592 atgtatttt-ggatttactcactgcccagatatctgccctgatgaactacagaa-gttag 649
||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 590 atgtatttttggatttactcactgcccagatatctgccctgatgaacttcagaaagttag 649
Query: 650 cagatgcagttgataaaataaaggagaaatctggaattgaaattgtaccagtttttatct 709
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 650 cagttgcagttgataaaataaaggagaaatctggaattgaaattgtgccagtttttatct 709
Query: 710 ctgttgatcctgagagggataccgttgagcaagtcggtgaatacgtcaaagaatttcatc 769
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 710 ctgttgatcctgagaggggtaccgttgagcaagtcagtgaatacgtcaaagaatttcttc 769
Query: 770 caaagttaattggattaactggtagctcagatgagataaagagcgtagctcgtgcatatc 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 caaagttaattggattaactggtagctcagatgagataaagagcgtagctcgtgcatatc 829
Query: 830 gtgtttattacatgaagacagcagaggaagactcagattatcttgttgatcactccatag 889
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 830 gtgtttattacatgaagacagcagaagaggactcagattatcttgttgatcactccatag 889
Query: 890 ttatgtacttgatggggcctgacatgaattttgttaagtttttcggcaagaacaatgatg 949
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 890 ttatgtacttgatggggcctgacatgaattatgtaaagtttttcggcaagaacaatgatg 949
Query: 950 ctgactcacttgctgatggaataattaaagagataaagcagtataagaa 998
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 950 ctgactcacttgctgatggaatagttaaagagataaagcagtataagaa 998
>gnl|LJGI|TC82551 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 572
Score = 478 bits (241), Expect = e-134
Identities = 289/305 (94%)
Strand = Plus / Plus
Query: 366 gcctgtttcttggttgagctttgttttgctggttttaactggagctggattggtatttta 425
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 118 gcctgtttcgtggttgagctttgttttgctggttttaactggagcaggattggtatttta 177
Query: 426 ctatgacagagaaaagaaacgacatattgaagacatacatagtgcttcggaggcagtgaa 485
||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct: 178 ctatgacagagaaaagaaacgacatattgaagacatacataatgcttagaaggcagtgaa 237
Query: 486 gcatggaccttctgcgggaaaagctgcaattgggggtccatttcaccttaccaaccatca 545
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gcctggaccttatgcgggaaaagctgcaattgggggtccatttcaccttaccaaccatca 297
Query: 546 cgggaagcgcgttactgaaaaggacttcttggggaagtggacagtgatgtattttggatt 605
||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 298 tgggaagcacgttactgtaaaggacttcttgggaaagtggacagtgatgtattttggatt 357
Query: 606 tactcactgcccagatatctgccctgatgaactacagaagttagcagatgcagttgataa 665
|| |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 358 tagtcactgcccaagtatctgctctgatgaactacataagttagcagatgcagttgataa 417
Query: 666 aataa 670
|||||
Sbjct: 418 aataa 422
>gnl|LJGI|TC67228 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 856
Score = 478 bits (241), Expect = e-134
Identities = 289/305 (94%)
Strand = Plus / Plus
Query: 366 gcctgtttcttggttgagctttgttttgctggttttaactggagctggattggtatttta 425
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 188 gcctgtttcgtggttgagctttgttttgctggttttaactggagcaggattggtatttta 247
Query: 426 ctatgacagagaaaagaaacgacatattgaagacatacatagtgcttcggaggcagtgaa 485
||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct: 248 ctatgacagagaaaagaaacgacatattgaagacatacataatgcttagaaggcagtgaa 307
Query: 486 gcatggaccttctgcgggaaaagctgcaattgggggtccatttcaccttaccaaccatca 545
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcctggaccttatgcgggaaaagctgcaattgggggtccatttcaccttaccaaccatcc 367
Query: 546 cgggaagcgcgttactgaaaaggacttcttggggaagtggacagtgatgtattttggatt 605
||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 368 tgggaagcacgttactgtaaaggacttcttgggaaagtggacagtgatgtattttggatt 427
Query: 606 tactcactgcccagatatctgccctgatgaactacagaagttagcagatgcagttgataa 665
|| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 428 tagtcactgcccaagtatctgccctgatgaactacataagttagcagatgcagttgataa 487
Query: 666 aataa 670
|||||
Sbjct: 488 aataa 492
>gnl|LJGI|TC79081 similar to UniRef100_A7Q9Q5 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 1317
Score = 155 bits (78), Expect = 6e-37
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 1 atgtggaggtggacgtcaccgcaaatctcttatctcgttgctagattgagtcaagtgaaa 60
|||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 97 atgtggcggtggacgtcaccgcgaatctcttatctcgttggaagattgagtcaagtgaaa 156
Query: 61 ctgagtgatggccgttgctgttacagtcaattgttgca 98
||||||||||| ||||||||||||||||||||||||||
Sbjct: 157 ctgagtgatggtcgttgctgttacagtcaattgttgca 194
>gnl|LJGI|TC71286
Length = 795
Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 642 gaagttagcagatgcagttgataaaataa 670
|||||||||||||||||||||||||||||
Sbjct: 1 gaagttagcagatgcagttgataaaataa 29