Miyakogusa Predicted Gene

Lj1g3v0114030.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0114030.1 Non Chatacterized Hit- tr|I1NGI6|I1NGI6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48297
PE,85.25,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
KIP1,KIP1-like,CUFF.25234.1
         (366 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP043204 homologue to UniRef100_A7NWS4 Cluster: Chromos...    56   2e-07

>gnl|LJGI|BP043204 homologue to UniRef100_A7NWS4 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (4%)
          Length = 563

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 37  tattcttggtggtgggatagccacatttgtccgaagaattcaaaatggcttcaggagaac 96
           ||||| ||||||||||| ||||||||  | || ||||| ||||||||||| || || || 
Sbjct: 424 tattcatggtggtgggacagccacataagccctaagaactcaaaatggctccaagaaaat 483

                                                                       
Query: 97  cttacagacatagatgccaaagtcaaagcaatgatcaagctcattgaagaggacgcagac 156
           || ||||| || |||| ||| || ||   |||||| ||||| |||||||| || ||||| 
Sbjct: 484 ctgacagatatggatgtcaaggtgaagcaaatgattaagcttattgaagaagatgcagat 543

                               
Query: 157 tcatttgcaaggagggcaga 176
           || ||||| ||||| |||||
Sbjct: 544 tcctttgccaggagagcaga 563