Miyakogusa Predicted Gene

Lj1g3v0112940.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0112940.2 Non Chatacterized Hit- tr|H3HN80|H3HN80_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,34.55,0.0000000003,coiled-coil,NULL,CUFF.25221.2
         (504 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79109 similar to UniRef100_A7PX87 Cluster: Chromosome...   991   0.0  

>gnl|LJGI|TC79109 similar to UniRef100_A7PX87 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (76%)
          Length = 1140

 Score =  991 bits (500), Expect = 0.0
 Identities = 503/504 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcaatgggaagcgagtctagttgggttgggaagaaacctgtgaaacgcattggggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atgtcaatgggaagcgagtctagttgggttgggaagaaacctgtgaaacgcattggggga 218

                                                                       
Query: 61  atgtccgatgctctgtcaattgcttcagatctcggtttctccgtgtcatctctcccaacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atgtccgatgctctgtcaattgcttcagatctcggtttctccgtgtcatctctcccaacc 278

                                                                       
Query: 121 catcaggaagcacttcagaatccctcaaccgctactggtgagaagggtgaggatttgatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 catcaggaagcacttcagaatccctcaaccgctactggtgagaagggtgaggatttgatc 338

                                                                       
Query: 181 aaggttttaagagaacttaccacagtccaaaggaaaattgcagatttgcaagtcgaactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aaggttttaagagaacttaccacagtccaaaggaaaattgcagatttgcaagtcgaactt 398

                                                                       
Query: 241 caaggtcgaaaggatgataaaaatgtagcgcatttgacgcatgtaagtgaaatggagaag 300
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 399 caaggtcgaaaggatgataaaaatgtagtgcatttgacgcatgtaagtgaaatggagaag 458

                                                                       
Query: 301 aagattgagacgttggaatggattactactatcctcaaagatgttattcagaataaggac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aagattgagacgttggaatggattactactatcctcaaagatgttattcagaataaggac 518

                                                                       
Query: 361 cgcataatagctcgcctgcagcaaccgtattccctggattgcattcctgttgaagcagaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cgcataatagctcgcctgcagcaaccgtattccctggattgcattcctgttgaagcagaa 578

                                                                       
Query: 421 tatcagaaacaattctctgagttactgatgaaggcagctagtgattatggtgccttgaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tatcagaaacaattctctgagttactgatgaaggcagctagtgattatggtgccttgaca 638

                                   
Query: 481 gcatccgtggcagattttcagtgg 504
           ||||||||||||||||||||||||
Sbjct: 639 gcatccgtggcagattttcagtgg 662