Miyakogusa Predicted Gene

Lj1g3v0112680.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0112680.1 Non Chatacterized Hit- tr|D8RGF1|D8RGF1_SELML
Putative uncharacterized protein OS=Selaginella
moelle,47.19,0.00000000001,FAMILY NOT NAMED,NULL; seg,NULL;
Auxin_canalis,Domain of unknown function DUF828;
PH_2,Pleckstrin-li,NODE_47257_length_2057_cov_28.406418.path1.1
         (1410 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78315 homologue to UniRef100_A7NWT2 Cluster: Chromoso...  1211   0.0  
gnl|LJGI|TC63167 similar to UniRef100_A7NWT2 Cluster: Chromosome...   722   0.0  
gnl|LJGI|TC65396 similar to UniRef100_A7NWT2 Cluster: Chromosome...   462   e-129
gnl|LJGI|AV408648 similar to UniRef100_A7NWT2 Cluster: Chromosom...   121   1e-26
gnl|LJGI|TC72835 similar to UniRef100_A7NWT2 Cluster: Chromosome...   121   1e-26

>gnl|LJGI|TC78315 homologue to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 795

 Score = 1211 bits (611), Expect = 0.0
 Identities = 621/623 (99%), Gaps = 1/623 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacaaggcacaaaccgaaccatggcgacccgacccacttcacatgttccggccaccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atggacaaggcacaaaccgaaccatggcgacccgacccacttcacatgttccggccaccg 232

                                                                       
Query: 61  gagacaccgcgtgagccgatggagttcctctctcgttcatggagcgtctcagctatggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gagacaccgcgtgagccgatggagttcctctctcgttcatggagcgtctcagctatggag 292

                                                                       
Query: 121 gtctccaaggctctgtctccagcaacttccaaagcggcaccaaatgtcaccggcggcgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 293 gtctccaaggctctgtctccagcaacttccaaagcggcaccaaatgtcaccggcggcgtc 352

                                                                       
Query: 181 tcgatacaggaggacgtagccggcgaa-gttgaagaagctgccactgtttccggacaccc 239
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 353 tcgatacaggaggacgtagccggcgaaagttgaagaagctgccactgtttccggacaccc 412

                                                                       
Query: 240 tttttcctttgcttcctctgagacctctcagatggtcatggaacgcatcctgtcacaatc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tttttcctttgcttcctctgagacctctcagatggtcatggaacgcatcctgtcacaatc 472

                                                                       
Query: 300 tcaggaggtatcttctccacgaacctcagggaggctctctcacagtagtggccctctgaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tcaggaggtatcttctccacgaacctcagggaggctctctcacagtagtggccctctgaa 532

                                                                       
Query: 360 cggaaatcaaagctgtggttccgatagcccccctgtttcaccctctgaaatcgatgatat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cggaaatcaaagctgtggttccgatagcccccctgtttcaccctctgaaatcgatgatat 592

                                                                       
Query: 420 caagttttgccgtgtcaacaacagcagcagcggtaatttcagggctgccgtggccgctgc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 caagttttgccgtgtcaacaacagcagcagcggtaatttcagggctgccgtggccgctgc 652

                                                                       
Query: 480 tgcggggcctggtggtgtcggcggcagcaagacggtagggaggtggctcaaggataggaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tgcggggcctggtggtgtcggcggcagcaagacggtagggaggtggctcaaggataggaa 712

                                                                       
Query: 540 ggagaagaagaaagaggaaaccagggcccacaatgctcagctccatgcggctgtttcagt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ggagaagaagaaagaggaaaccagggcccacaatgctcagctccatgcggctgtttcagt 772

                                  
Query: 600 tgccggtcttgccgctgcggttg 622
           |||||||||||||||||||||||
Sbjct: 773 tgccggtcttgccgctgcggttg 795


>gnl|LJGI|TC63167 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (26%)
          Length = 897

 Score =  722 bits (364), Expect = 0.0
 Identities = 367/368 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1043 tgctagccagaggtggtgatcttctcaagcgcacacgcaaaggtgatcttcattggaaag 1102
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2    tgctagccagaggtggtgatcttctcaagcgcacatgcaaaggtgatcttcattggaaag 61

                                                                        
Query: 1103 ttgtatctgtgtatataaacaaaatgaatcaggttactgtgaaaatgaagagcaagcatg 1162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   ttgtatctgtgtatataaacaaaatgaatcaggttactgtgaaaatgaagagcaagcatg 121

                                                                        
Query: 1163 ttgctgggaccttcaccaaaaagaaaaagaatgtggtgattgaagtgatcaaagatatgc 1222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  ttgctgggaccttcaccaaaaagaaaaagaatgtggtgattgaagtgatcaaagatatgc 181

                                                                        
Query: 1223 ctgcctggcccggccgccacttgctggaaggcggtgagaatcgtcgctactttgggctta 1282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  ctgcctggcccggccgccacttgctggaaggcggtgagaatcgtcgctactttgggctta 241

                                                                        
Query: 1283 aaactgtgacgcgcggtgttgttgagtttgagtgcgtaaatcagagggagtatgatgttt 1342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  aaactgtgacgcgcggtgttgttgagtttgagtgcgtaaatcagagggagtatgatgttt 301

                                                                        
Query: 1343 ggactcagggcgtgactcggcttctttccattgctgcagaaaagaacaacagaaacagaa 1402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  ggactcagggcgtgactcggcttctttccattgctgcagaaaagaacaacagaaacagaa 361

                    
Query: 1403 tatgagct 1410
            ||||||||
Sbjct: 362  tatgagct 369


>gnl|LJGI|TC65396 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (64%)
          Length = 1421

 Score =  462 bits (233), Expect = e-129
 Identities = 741/911 (81%), Gaps = 12/911 (1%)
 Strand = Plus / Plus

                                                                        
Query: 508  aagacggtagggaggtggctcaaggataggaaggagaagaagaaagaggaaaccagggcc 567
            ||||| || ||||||||||| ||||| ||||||||||||||||| || ||||  ||||||
Sbjct: 130  aagaccgttgggaggtggctgaaggacaggaaggagaagaagaaggaagaaatgagggcc 189

                                                                        
Query: 568  cacaatgctcagctccatgcggctgtttcagttgccggtcttgccgctgcggttgcggct 627
            || |||||||||||||| ||||| ||||| ||||||||  ||||||| || |||||||| 
Sbjct: 190  cagaatgctcagctccacgcggcggtttcggttgccggggttgccgcagcagttgcggcc 249

                                                                        
Query: 628  atcgctgctgccacggctgcctcgtcggcgtccaccaaggatgagcatatggcgaagacc 687
            || || || || || || || || || |  |||  |||||| ||||| ||||| ||||| 
Sbjct: 250  attgccgccgcaaccgccgcttcttcaggctccggcaaggacgagcagatggccaagacg 309

                                                                        
Query: 688  gatatggcggtggcttctgcggcaacccttgtggcggcccagtgtgtggaggcagcagag 747
            || ||||||||||| || ||||| || || ||||| || |||||||| ||||| || || 
Sbjct: 310  gacatggcggtggcgtcggcggccacgctggtggctgctcagtgtgttgaggctgcggaa 369

                                                                        
Query: 748  gccttaggggtggagcgtgagcacctcgcctcggtggtcagctccgccgtcaatgttaga 807
            ||  | || |  ||||| || |||||   || |||||| ||||||||||| ||||| || 
Sbjct: 370  gctatgggagctgagcgggatcacctgagcttggtggttagctccgccgtgaatgtgagg 429

                                                                        
Query: 808  tcagccggtgatatcatgactttaactgcagcagcagctacagctttgcgtggggctgca 867
            || ||||| || ||||||||||| || || || || || |||||||| ||||||||||| 
Sbjct: 430  tctgccggcgacatcatgactttgacagcggcggcggcgacagctttacgtggggctgcc 489

                                                                        
Query: 868  acattaaaagctagggccttgaaggatgtttggaatattgcagctgttattcctgtggag 927
            || || ||||| |||||| | || || |||||||||||||||||||| ||||||||||||
Sbjct: 490  acgttgaaagcaagggcccttaaagaggtttggaatattgcagctgtaattcctgtggag 549

                                                                        
Query: 928  aagaatttagggggtggtgg---------tagtgggaatag---tggtagcaatggaagt 975
            |||||||| || ||||||||         || ||| ||| |   |||||||||||| |||
Sbjct: 550  aagaatttgggaggtggtggctatggtaataatggtaatggcaatggtagcaatggcagt 609

                                                                        
Query: 976  tctaatagtagtttcagtggtgagcttcccctagaggagaatttcttgggtatttgtagt 1035
            ||| | ||||| ||||||||||| |||   | ||| || ||||||||||| || ||||||
Sbjct: 610  tctcacagtagcttcagtggtgaacttgtgccagaagaaaatttcttgggcatctgtagt 669

                                                                        
Query: 1036 agagaattgctagccagaggtggtgatcttctcaagcgcacacgcaaaggtgatcttcat 1095
            |||||||||||||| |||||| |||| || ||||| ||||| |||| |||||| || |||
Sbjct: 670  agagaattgctagctagaggttgtgagctcctcaaacgcacgcgcacaggtgagctgcat 729

                                                                        
Query: 1096 tggaaagttgtatctgtgtatataaacaaaatgaatcaggttactgtgaaaatgaagagc 1155
            |||||| |||||||||| ||||||||||  ||||| ||||||| | |||| |||||||||
Sbjct: 730  tggaaaattgtatctgtttatataaacaggatgaaccaggttattctgaagatgaagagc 789

                                                                        
Query: 1156 aagcatgttgctgggaccttcaccaaaaagaaaaagaatgtggtgattgaagtgatcaaa 1215
            |  ||||||||||||||| |||| ||||||||||||||||||||| |||  ||||| |||
Sbjct: 790  agacatgttgctgggaccatcacaaaaaagaaaaagaatgtggtgcttggggtgattaaa 849

                                                                        
Query: 1216 gatatgcctgcctggcccggccgccacttgctggaaggcggtgagaatcgtcgctacttt 1275
            |||||||  || ||||| ||||| |||||||| ||||| || |||||||| |||||||||
Sbjct: 850  gatatgcaggcttggcctggccggcacttgctagaaggtggcgagaatcgccgctacttt 909

                                                                        
Query: 1276 gggcttaaaactgtgacgcgcggtgttgttgagtttgagtgcgtaaatcagagggagtat 1335
            ||  | || || |||| ||| |||||||| || |||||||||  |||||| || ||||||
Sbjct: 910  ggtttgaagacggtgatgcggggtgttgtggaatttgagtgcagaaatcaaagagagtat 969

                                                                        
Query: 1336 gatgtttggactcagggcgtgactcggcttctttccattgctgcagaaaagaacaacaga 1395
            ||||| |||||||| || ||| |  ||||||| ||  |||||||||||| ||||||||  
Sbjct: 970  gatgtgtggactcaaggtgtgtcaaggcttctgtcgtttgctgcagaaaggaacaacaag 1029

                       
Query: 1396 aacagaatatg 1406
            |||||||||||
Sbjct: 1030 aacagaatatg 1040


>gnl|LJGI|AV408648 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 430

 Score =  121 bits (61), Expect = 1e-26
 Identities = 141/167 (84%), Gaps = 3/167 (1%)
 Strand = Plus / Plus

                                                                       
Query: 190 gaggacgtagccggcgaagttgaagaagctgccactgtttccggacaccctttttccttt 249
           |||||| |||| || |||||||||||  |||| |||||||| ||  ||||||||||||||
Sbjct: 196 gaggacatagctggtgaagttgaagagtctgctactgtttctggcaaccctttttccttt 255

                                                                       
Query: 250 gcttcctctgagacctctcagatggtcatggaacgcatcctgtcacaatctcaggaggta 309
           ||||||||| | |||||||||||||||||||| || ||| ||||||| || ||||| |||
Sbjct: 256 gcttcctctcaaacctctcagatggtcatggaccgtatcatgtcacactcgcaggatgta 315

                                                          
Query: 310 tcttctccacgaacctcagggaggctctctcacagtagtggccctct 356
              |||||||| || ||||| || |||||||| || |||||||||||
Sbjct: 316 ---tctccacgcacatcaggaagactctctcatagcagtggccctct 359


>gnl|LJGI|TC72835 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (33%)
          Length = 705

 Score =  121 bits (61), Expect = 1e-26
 Identities = 141/167 (84%), Gaps = 3/167 (1%)
 Strand = Plus / Plus

                                                                       
Query: 190 gaggacgtagccggcgaagttgaagaagctgccactgtttccggacaccctttttccttt 249
           |||||| |||| || |||||||||||  |||| |||||||| ||  ||||||||||||||
Sbjct: 252 gaggacatagctggtgaagttgaagagtctgctactgtttctggcaaccctttttccttt 311

                                                                       
Query: 250 gcttcctctgagacctctcagatggtcatggaacgcatcctgtcacaatctcaggaggta 309
           ||||||||| | |||||||||||||||||||| || ||| ||||||| || ||||| |||
Sbjct: 312 gcttcctctcaaacctctcagatggtcatggaccgtatcatgtcacactcgcaggatgta 371

                                                          
Query: 310 tcttctccacgaacctcagggaggctctctcacagtagtggccctct 356
              |||||||| || ||||| || |||||||| || |||||||||||
Sbjct: 372 ---tctccacgcacatcaggaagactctctcatagcagtggccctct 415



 Score =  109 bits (55), Expect = 5e-23
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 508 aagacggtagggaggtggctcaaggataggaaggagaagaagaaagaggaaaccagggcc 567
           ||||| || ||||||||||| ||||| ||||||||||||||||| || ||||  ||||||
Sbjct: 564 aagaccgttgggaggtggctgaaggacaggaaggagaagaagaaggaagaaatgagggcc 623

                                                                      
Query: 568 cacaatgctcagctccatgcggctgtttcagttgccggtcttgccgctgcggttgcggc 626
           || |||||||||||||| ||||| ||||| ||||||||  ||||||| || ||||||||
Sbjct: 624 cagaatgctcagctccacgcggcggtttcggttgccggggttgccgcagcagttgcggc 682