Miyakogusa Predicted Gene
- Lj1g3v0112680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0112680.1 Non Chatacterized Hit- tr|D8RGF1|D8RGF1_SELML
Putative uncharacterized protein OS=Selaginella
moelle,47.19,0.00000000001,FAMILY NOT NAMED,NULL; seg,NULL;
Auxin_canalis,Domain of unknown function DUF828;
PH_2,Pleckstrin-li,NODE_47257_length_2057_cov_28.406418.path1.1
(1410 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78315 homologue to UniRef100_A7NWT2 Cluster: Chromoso... 1211 0.0
gnl|LJGI|TC63167 similar to UniRef100_A7NWT2 Cluster: Chromosome... 722 0.0
gnl|LJGI|TC65396 similar to UniRef100_A7NWT2 Cluster: Chromosome... 462 e-129
gnl|LJGI|AV408648 similar to UniRef100_A7NWT2 Cluster: Chromosom... 121 1e-26
gnl|LJGI|TC72835 similar to UniRef100_A7NWT2 Cluster: Chromosome... 121 1e-26
>gnl|LJGI|TC78315 homologue to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 795
Score = 1211 bits (611), Expect = 0.0
Identities = 621/623 (99%), Gaps = 1/623 (0%)
Strand = Plus / Plus
Query: 1 atggacaaggcacaaaccgaaccatggcgacccgacccacttcacatgttccggccaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atggacaaggcacaaaccgaaccatggcgacccgacccacttcacatgttccggccaccg 232
Query: 61 gagacaccgcgtgagccgatggagttcctctctcgttcatggagcgtctcagctatggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gagacaccgcgtgagccgatggagttcctctctcgttcatggagcgtctcagctatggag 292
Query: 121 gtctccaaggctctgtctccagcaacttccaaagcggcaccaaatgtcaccggcggcgtt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gtctccaaggctctgtctccagcaacttccaaagcggcaccaaatgtcaccggcggcgtc 352
Query: 181 tcgatacaggaggacgtagccggcgaa-gttgaagaagctgccactgtttccggacaccc 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 353 tcgatacaggaggacgtagccggcgaaagttgaagaagctgccactgtttccggacaccc 412
Query: 240 tttttcctttgcttcctctgagacctctcagatggtcatggaacgcatcctgtcacaatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tttttcctttgcttcctctgagacctctcagatggtcatggaacgcatcctgtcacaatc 472
Query: 300 tcaggaggtatcttctccacgaacctcagggaggctctctcacagtagtggccctctgaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tcaggaggtatcttctccacgaacctcagggaggctctctcacagtagtggccctctgaa 532
Query: 360 cggaaatcaaagctgtggttccgatagcccccctgtttcaccctctgaaatcgatgatat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cggaaatcaaagctgtggttccgatagcccccctgtttcaccctctgaaatcgatgatat 592
Query: 420 caagttttgccgtgtcaacaacagcagcagcggtaatttcagggctgccgtggccgctgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 caagttttgccgtgtcaacaacagcagcagcggtaatttcagggctgccgtggccgctgc 652
Query: 480 tgcggggcctggtggtgtcggcggcagcaagacggtagggaggtggctcaaggataggaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tgcggggcctggtggtgtcggcggcagcaagacggtagggaggtggctcaaggataggaa 712
Query: 540 ggagaagaagaaagaggaaaccagggcccacaatgctcagctccatgcggctgtttcagt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ggagaagaagaaagaggaaaccagggcccacaatgctcagctccatgcggctgtttcagt 772
Query: 600 tgccggtcttgccgctgcggttg 622
|||||||||||||||||||||||
Sbjct: 773 tgccggtcttgccgctgcggttg 795
>gnl|LJGI|TC63167 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 897
Score = 722 bits (364), Expect = 0.0
Identities = 367/368 (99%)
Strand = Plus / Plus
Query: 1043 tgctagccagaggtggtgatcttctcaagcgcacacgcaaaggtgatcttcattggaaag 1102
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 tgctagccagaggtggtgatcttctcaagcgcacatgcaaaggtgatcttcattggaaag 61
Query: 1103 ttgtatctgtgtatataaacaaaatgaatcaggttactgtgaaaatgaagagcaagcatg 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttgtatctgtgtatataaacaaaatgaatcaggttactgtgaaaatgaagagcaagcatg 121
Query: 1163 ttgctgggaccttcaccaaaaagaaaaagaatgtggtgattgaagtgatcaaagatatgc 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttgctgggaccttcaccaaaaagaaaaagaatgtggtgattgaagtgatcaaagatatgc 181
Query: 1223 ctgcctggcccggccgccacttgctggaaggcggtgagaatcgtcgctactttgggctta 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctgcctggcccggccgccacttgctggaaggcggtgagaatcgtcgctactttgggctta 241
Query: 1283 aaactgtgacgcgcggtgttgttgagtttgagtgcgtaaatcagagggagtatgatgttt 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaactgtgacgcgcggtgttgttgagtttgagtgcgtaaatcagagggagtatgatgttt 301
Query: 1343 ggactcagggcgtgactcggcttctttccattgctgcagaaaagaacaacagaaacagaa 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggactcagggcgtgactcggcttctttccattgctgcagaaaagaacaacagaaacagaa 361
Query: 1403 tatgagct 1410
||||||||
Sbjct: 362 tatgagct 369
>gnl|LJGI|TC65396 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (64%)
Length = 1421
Score = 462 bits (233), Expect = e-129
Identities = 741/911 (81%), Gaps = 12/911 (1%)
Strand = Plus / Plus
Query: 508 aagacggtagggaggtggctcaaggataggaaggagaagaagaaagaggaaaccagggcc 567
||||| || ||||||||||| ||||| ||||||||||||||||| || |||| ||||||
Sbjct: 130 aagaccgttgggaggtggctgaaggacaggaaggagaagaagaaggaagaaatgagggcc 189
Query: 568 cacaatgctcagctccatgcggctgtttcagttgccggtcttgccgctgcggttgcggct 627
|| |||||||||||||| ||||| ||||| |||||||| ||||||| || ||||||||
Sbjct: 190 cagaatgctcagctccacgcggcggtttcggttgccggggttgccgcagcagttgcggcc 249
Query: 628 atcgctgctgccacggctgcctcgtcggcgtccaccaaggatgagcatatggcgaagacc 687
|| || || || || || || || || | ||| |||||| ||||| ||||| |||||
Sbjct: 250 attgccgccgcaaccgccgcttcttcaggctccggcaaggacgagcagatggccaagacg 309
Query: 688 gatatggcggtggcttctgcggcaacccttgtggcggcccagtgtgtggaggcagcagag 747
|| ||||||||||| || ||||| || || ||||| || |||||||| ||||| || ||
Sbjct: 310 gacatggcggtggcgtcggcggccacgctggtggctgctcagtgtgttgaggctgcggaa 369
Query: 748 gccttaggggtggagcgtgagcacctcgcctcggtggtcagctccgccgtcaatgttaga 807
|| | || | ||||| || ||||| || |||||| ||||||||||| ||||| ||
Sbjct: 370 gctatgggagctgagcgggatcacctgagcttggtggttagctccgccgtgaatgtgagg 429
Query: 808 tcagccggtgatatcatgactttaactgcagcagcagctacagctttgcgtggggctgca 867
|| ||||| || ||||||||||| || || || || || |||||||| |||||||||||
Sbjct: 430 tctgccggcgacatcatgactttgacagcggcggcggcgacagctttacgtggggctgcc 489
Query: 868 acattaaaagctagggccttgaaggatgtttggaatattgcagctgttattcctgtggag 927
|| || ||||| |||||| | || || |||||||||||||||||||| ||||||||||||
Sbjct: 490 acgttgaaagcaagggcccttaaagaggtttggaatattgcagctgtaattcctgtggag 549
Query: 928 aagaatttagggggtggtgg---------tagtgggaatag---tggtagcaatggaagt 975
|||||||| || |||||||| || ||| ||| | |||||||||||| |||
Sbjct: 550 aagaatttgggaggtggtggctatggtaataatggtaatggcaatggtagcaatggcagt 609
Query: 976 tctaatagtagtttcagtggtgagcttcccctagaggagaatttcttgggtatttgtagt 1035
||| | ||||| ||||||||||| ||| | ||| || ||||||||||| || ||||||
Sbjct: 610 tctcacagtagcttcagtggtgaacttgtgccagaagaaaatttcttgggcatctgtagt 669
Query: 1036 agagaattgctagccagaggtggtgatcttctcaagcgcacacgcaaaggtgatcttcat 1095
|||||||||||||| |||||| |||| || ||||| ||||| |||| |||||| || |||
Sbjct: 670 agagaattgctagctagaggttgtgagctcctcaaacgcacgcgcacaggtgagctgcat 729
Query: 1096 tggaaagttgtatctgtgtatataaacaaaatgaatcaggttactgtgaaaatgaagagc 1155
|||||| |||||||||| |||||||||| ||||| ||||||| | |||| |||||||||
Sbjct: 730 tggaaaattgtatctgtttatataaacaggatgaaccaggttattctgaagatgaagagc 789
Query: 1156 aagcatgttgctgggaccttcaccaaaaagaaaaagaatgtggtgattgaagtgatcaaa 1215
| ||||||||||||||| |||| ||||||||||||||||||||| ||| ||||| |||
Sbjct: 790 agacatgttgctgggaccatcacaaaaaagaaaaagaatgtggtgcttggggtgattaaa 849
Query: 1216 gatatgcctgcctggcccggccgccacttgctggaaggcggtgagaatcgtcgctacttt 1275
||||||| || ||||| ||||| |||||||| ||||| || |||||||| |||||||||
Sbjct: 850 gatatgcaggcttggcctggccggcacttgctagaaggtggcgagaatcgccgctacttt 909
Query: 1276 gggcttaaaactgtgacgcgcggtgttgttgagtttgagtgcgtaaatcagagggagtat 1335
|| | || || |||| ||| |||||||| || ||||||||| |||||| || ||||||
Sbjct: 910 ggtttgaagacggtgatgcggggtgttgtggaatttgagtgcagaaatcaaagagagtat 969
Query: 1336 gatgtttggactcagggcgtgactcggcttctttccattgctgcagaaaagaacaacaga 1395
||||| |||||||| || ||| | ||||||| || |||||||||||| ||||||||
Sbjct: 970 gatgtgtggactcaaggtgtgtcaaggcttctgtcgtttgctgcagaaaggaacaacaag 1029
Query: 1396 aacagaatatg 1406
|||||||||||
Sbjct: 1030 aacagaatatg 1040
>gnl|LJGI|AV408648 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 430
Score = 121 bits (61), Expect = 1e-26
Identities = 141/167 (84%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 190 gaggacgtagccggcgaagttgaagaagctgccactgtttccggacaccctttttccttt 249
|||||| |||| || ||||||||||| |||| |||||||| || ||||||||||||||
Sbjct: 196 gaggacatagctggtgaagttgaagagtctgctactgtttctggcaaccctttttccttt 255
Query: 250 gcttcctctgagacctctcagatggtcatggaacgcatcctgtcacaatctcaggaggta 309
||||||||| | |||||||||||||||||||| || ||| ||||||| || ||||| |||
Sbjct: 256 gcttcctctcaaacctctcagatggtcatggaccgtatcatgtcacactcgcaggatgta 315
Query: 310 tcttctccacgaacctcagggaggctctctcacagtagtggccctct 356
|||||||| || ||||| || |||||||| || |||||||||||
Sbjct: 316 ---tctccacgcacatcaggaagactctctcatagcagtggccctct 359
>gnl|LJGI|TC72835 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 705
Score = 121 bits (61), Expect = 1e-26
Identities = 141/167 (84%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 190 gaggacgtagccggcgaagttgaagaagctgccactgtttccggacaccctttttccttt 249
|||||| |||| || ||||||||||| |||| |||||||| || ||||||||||||||
Sbjct: 252 gaggacatagctggtgaagttgaagagtctgctactgtttctggcaaccctttttccttt 311
Query: 250 gcttcctctgagacctctcagatggtcatggaacgcatcctgtcacaatctcaggaggta 309
||||||||| | |||||||||||||||||||| || ||| ||||||| || ||||| |||
Sbjct: 312 gcttcctctcaaacctctcagatggtcatggaccgtatcatgtcacactcgcaggatgta 371
Query: 310 tcttctccacgaacctcagggaggctctctcacagtagtggccctct 356
|||||||| || ||||| || |||||||| || |||||||||||
Sbjct: 372 ---tctccacgcacatcaggaagactctctcatagcagtggccctct 415
Score = 109 bits (55), Expect = 5e-23
Identities = 103/119 (86%)
Strand = Plus / Plus
Query: 508 aagacggtagggaggtggctcaaggataggaaggagaagaagaaagaggaaaccagggcc 567
||||| || ||||||||||| ||||| ||||||||||||||||| || |||| ||||||
Sbjct: 564 aagaccgttgggaggtggctgaaggacaggaaggagaagaagaaggaagaaatgagggcc 623
Query: 568 cacaatgctcagctccatgcggctgtttcagttgccggtcttgccgctgcggttgcggc 626
|| |||||||||||||| ||||| ||||| |||||||| ||||||| || ||||||||
Sbjct: 624 cagaatgctcagctccacgcggcggtttcggttgccggggttgccgcagcagttgcggc 682