Miyakogusa Predicted Gene

Lj1g3v0112660.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0112660.1 Non Chatacterized Hit- tr|B8BGW1|B8BGW1_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,57.84,1e-17,DUF4005,Domain of unknown function DUF4005; IQ,IQ
motif, EF-hand binding site; seg,NULL; IQD
(IQ-DOM,NODE_59977_length_1868_cov_26.831905.path1.1
         (1416 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP050651 similar to UniRef100_A7NWS9 Cluster: Chromosom...   644   0.0  

>gnl|LJGI|BP050651 similar to UniRef100_A7NWS9 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (96%)
          Length = 553

 Score =  644 bits (325), Expect = 0.0
 Identities = 328/329 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1088 attacatggctaacacagaatcatcaagggccaaagtcagatcacacagcgcaccgagac 1147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553  attacatggctaacacagaatcatcaagggccaaagtcagatcacacagcgcaccgagac 494

                                                                        
Query: 1148 aaaggccggattcatttgagaggcaaccgagccgtcgaaggccttcaattgaaggaagga 1207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493  aaaggccggattcatttgagaggcaaccgagccgtcgaaggccttcaattgaaggaagga 434

                                                                        
Query: 1208 atgtgccaagaccagttaggatgatgcagaggtcatcttcacatgtgggtgccactgctc 1267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433  atgtgccaagaccagttaggatgatgcagaggtcatcttcacatgtgggtgccactgctc 374

                                                                        
Query: 1268 agaactaccaatatccatggtcaatcaagcttgacagatctgcagtttcactcaaagata 1327
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373  agaactacccatatccatggtcaatcaagcttgacagatctgcagtttcactcaaagata 314

                                                                        
Query: 1328 gtgagtgtggctccacaagtacagtgctcacaaacactaattactgcagatctcttgttg 1387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313  gtgagtgtggctccacaagtacagtgctcacaaacactaattactgcagatctcttgttg 254

                                         
Query: 1388 catatgatgcacatgaagataggtactga 1416
            |||||||||||||||||||||||||||||
Sbjct: 253  catatgatgcacatgaagataggtactga 225