Miyakogusa Predicted Gene

Lj1g3v0112610.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0112610.1 Non Chatacterized Hit- tr|I1LE24|I1LE24_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.96,0,seg,NULL;
KIP1,KIP1-like; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_25892_length_6240_cov_33.447277.path1.1
         (5409 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BF177633                                                     317   4e-85
gnl|LJGI|BP063872 weakly similar to UniRef100_A7PUE2 Cluster: Ch...   139   2e-31
gnl|LJGI|BP043204 homologue to UniRef100_A7NWS4 Cluster: Chromos...    84   1e-14
gnl|LJGI|TC75367 similar to UniRef100_Q9XEY9 Cluster: NT3; n=1; ...    80   2e-13

>gnl|LJGI|BF177633 
          Length = 180

 Score =  317 bits (160), Expect = 4e-85
 Identities = 176/180 (97%), Gaps = 1/180 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4737 ggatgttatcatggcacatcagtcagataattcaggtaaaatcctaaatacttcttcaga 4796
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    ggatgttatcatggcacatcagtcagataattcaggtaaaatcctaaatacttcttcaga 61

                                                                        
Query: 4797 attggatgcagaaaaggaattgggtgttgacaagcttcagttgtcaagaagtataaaaga 4856
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 62   attggatgcagaaaaggaattgggtgttgacaagcttcagttgtcaagaagtattaaaga 121

                                                                        
Query: 4857 cagaactcaagatggaagcaagaggagaaagatattggagaggctcacctcggattcgca 4916
            |||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 122  cagaactccagatggaagccagaggagaaagatattggagaggctca-ctcggattcgca 180


>gnl|LJGI|BP063872 weakly similar to UniRef100_A7PUE2 Cluster: Chromosome chr7
            scaffold_31, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 445

 Score =  139 bits (70), Expect = 2e-31
 Identities = 226/278 (81%)
 Strand = Plus / Plus

                                                                        
Query: 2396 tagaagaaaaatactctgatatggagaaagacaaagaaagcagagtcaatcaagtagata 2455
            |||||||||||||  ||||| ||| ||| ||||||||||||| || ||||||||||||  
Sbjct: 25   tagaagaaaaatatgctgatgtggggaaggacaaagaaagcacagacaatcaagtagagg 84

                                                                        
Query: 2456 aacttcatgatttgcttttggcacaaaaagaaaagcacgctaatcataaacattcaagtg 2515
            |||| | || ||   |||| |  ||||| |||||||| |||||||||||||| |  ||||
Sbjct: 85   aactgcgtgcttcaattttcgtgcaaaaggaaaagcatgctaatcataaacacttgagtg 144

                                                                        
Query: 2516 aatcccgattggcgaatttggaaaatcttgttcttcggcttcaagaagatcaccgattgg 2575
            || ||||||| ||||||||||| |||||||||| |   || |||||||| || || ||||
Sbjct: 145  aagcccgattagcgaatttggagaatcttgttcatgtactgcaagaagaacagcggttgg 204

                                                                        
Query: 2576 ggaaggcagaatttgaagaagaagtagataaagctgtaaatgctcatgttgagatgttta 2635
            |||||  |||||||| ||||||| | || |||||||| ||||||||  | |||||||| |
Sbjct: 205  ggaagatagaatttggagaagaacttgacaaagctgtcaatgctcaaatggagatgttca 264

                                                  
Query: 2636 ttttgcaaaaatgtatggaagacttggagcagaagaac 2673
            || ||||||| ||| | |||||  ||||||||| ||||
Sbjct: 265  ttatgcaaaattgtgtagaagaactggagcagatgaac 302


>gnl|LJGI|BP043204 homologue to UniRef100_A7NWS4 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (4%)
          Length = 563

 Score = 83.8 bits (42), Expect = 1e-14
 Identities = 111/134 (82%)
 Strand = Plus / Plus

                                                                       
Query: 37  tattcttggtggtgggatagccacattagcccaaagaattcaaaatggcttcaggataat 96
           ||||| ||||||||||| |||||||| ||||| ||||| ||||||||||| || || |||
Sbjct: 424 tattcatggtggtgggacagccacataagccctaagaactcaaaatggctccaagaaaat 483

                                                                       
Query: 97  cttacagacatggatgccaaagtcaaagcaatggtcaagcttattgaagaggatggagac 156
           || ||||| ||||||| ||| || ||   |||| | |||||||||||||| |||| ||| 
Sbjct: 484 ctgacagatatggatgtcaaggtgaagcaaatgattaagcttattgaagaagatgcagat 543

                         
Query: 157 tcatttgcgaggag 170
           || ||||| |||||
Sbjct: 544 tcctttgccaggag 557


>gnl|LJGI|TC75367 similar to UniRef100_Q9XEY9 Cluster: NT3; n=1; Nicotiana tabacum|Rep:
            NT3 - Nicotiana tabacum (Common tobacco), partial (6%)
          Length = 540

 Score = 79.8 bits (40), Expect = 2e-13
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                        
Query: 5200 ataggaagattgcagtttgaagtgcagaacatccaatatgttctgctgaaattggctgat 5259
            |||||||| ||||||||||| |||||||||||||| ||  || |||||||||||||||||
Sbjct: 69   ataggaaggttgcagtttgaggtgcagaacatccagtacattttgctgaaattggctgat 128

                    
Query: 5260 gaaaagaa 5267
            || |||||
Sbjct: 129  gagaagaa 136